Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6650 |
Symbol | |
ID | 8338014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7662834 |
End bp | 7663928 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959744 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003117337 |
Protein GI | 256395773 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.17574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTTCC CCCGCGAACG AGGACCGGAT ACGTTTCCGA ATGTGGTGGA CATCCGCGAG CTGGCCCGCC GTAGCGGGGT ATCGCAGGCA ACTGTGTCAC GGGCGCTCAA CGACCGTACG GAGGTGAGCA CGGAGACCCG GCGCCGCATC CTGGAACTCG CCGAGGAACT CGGCTACACC CCCAATCAGC CGGCCCGCAC CCTGGTCCGG CGCCGCTCGG ACATGATCGG TCTGCTCTGG GACACCGGCT ACGCCAACGA GGGCCGCCGC CCGGCCTTCT TGCTCGACCT GTTCGTCGGC ATCAAGCAGG CGCTGACCGC CGGCGGCTTC CATCTCATGG TCCTGTCGGT CGCCGACACC GCCGGCGTGG ACGCCTACCT GCGAGCCGCC CGCCAGCACA GCCTCGACGG CGTCATCATG ATGGGCGTCG ACGAAGGCCA CCCGGCCATC ACGGCCCTCG TCGACTCCGG CATCGCCTGC GTCGGCATAG ACCTCCCGCT GCAACGCAAA CGCACCACCT ACGTCACCTC CGACAACCGC AGCGGCGCAG CCAGCGCGGT CCGCCACCTG CACTCCCTCG GCCACCGCGC GATCGCGACC ATCACCGGCC CGCTCCCCGC GATGCCCGCC GCCGAACGCC TAGCCGGCTA CCGCTACGAA ATGGCCCGCG TAGGCCTCGA CCCCCACCCG GAGTACATCG AGCACGGCGA CTTCTACCTC TCCAGCGGCT ACGAATGCGC CCAGCGCCTG ATCGCCCTGC CCGAACCCCC CACAGCCATC TTCGCCGCCG GCGACGAAAT GGCCATCGGC GCCATGCAAG CCCTCCACGA CGCCGGCATC TCAGTCCCCG CAGACGTGGC AGTCGTCGGC TTCGACGACA TCGAGGCCGC CTCACTGGTC CGCCCGGCAC TCACGACCGT CGCCCAGGAC CGCGTCAGCA TCGGCGTCGG CGCAGTCGAG ACACTCCTGA CCGCCATCGG CTCCCCCGAC GACGACACCC GCGACGCGAA GCGGGACACG CACCCGACGG CCGCCGCGCC GCTTCTCATC CCCACGCAGC TCATCGTGCG GGGGTCGTGC GGGTCGGTGC GGTGA
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Protein sequence | MVFPRERGPD TFPNVVDIRE LARRSGVSQA TVSRALNDRT EVSTETRRRI LELAEELGYT PNQPARTLVR RRSDMIGLLW DTGYANEGRR PAFLLDLFVG IKQALTAGGF HLMVLSVADT AGVDAYLRAA RQHSLDGVIM MGVDEGHPAI TALVDSGIAC VGIDLPLQRK RTTYVTSDNR SGAASAVRHL HSLGHRAIAT ITGPLPAMPA AERLAGYRYE MARVGLDPHP EYIEHGDFYL SSGYECAQRL IALPEPPTAI FAAGDEMAIG AMQALHDAGI SVPADVAVVG FDDIEAASLV RPALTTVAQD RVSIGVGAVE TLLTAIGSPD DDTRDAKRDT HPTAAAPLLI PTQLIVRGSC GSVR
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