Gene Caci_6650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6650 
Symbol 
ID8338014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7662834 
End bp7663928 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content70% 
IMG OID644959744 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003117337 
Protein GI256395773 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.17574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTTCC CCCGCGAACG AGGACCGGAT ACGTTTCCGA ATGTGGTGGA CATCCGCGAG 
CTGGCCCGCC GTAGCGGGGT ATCGCAGGCA ACTGTGTCAC GGGCGCTCAA CGACCGTACG
GAGGTGAGCA CGGAGACCCG GCGCCGCATC CTGGAACTCG CCGAGGAACT CGGCTACACC
CCCAATCAGC CGGCCCGCAC CCTGGTCCGG CGCCGCTCGG ACATGATCGG TCTGCTCTGG
GACACCGGCT ACGCCAACGA GGGCCGCCGC CCGGCCTTCT TGCTCGACCT GTTCGTCGGC
ATCAAGCAGG CGCTGACCGC CGGCGGCTTC CATCTCATGG TCCTGTCGGT CGCCGACACC
GCCGGCGTGG ACGCCTACCT GCGAGCCGCC CGCCAGCACA GCCTCGACGG CGTCATCATG
ATGGGCGTCG ACGAAGGCCA CCCGGCCATC ACGGCCCTCG TCGACTCCGG CATCGCCTGC
GTCGGCATAG ACCTCCCGCT GCAACGCAAA CGCACCACCT ACGTCACCTC CGACAACCGC
AGCGGCGCAG CCAGCGCGGT CCGCCACCTG CACTCCCTCG GCCACCGCGC GATCGCGACC
ATCACCGGCC CGCTCCCCGC GATGCCCGCC GCCGAACGCC TAGCCGGCTA CCGCTACGAA
ATGGCCCGCG TAGGCCTCGA CCCCCACCCG GAGTACATCG AGCACGGCGA CTTCTACCTC
TCCAGCGGCT ACGAATGCGC CCAGCGCCTG ATCGCCCTGC CCGAACCCCC CACAGCCATC
TTCGCCGCCG GCGACGAAAT GGCCATCGGC GCCATGCAAG CCCTCCACGA CGCCGGCATC
TCAGTCCCCG CAGACGTGGC AGTCGTCGGC TTCGACGACA TCGAGGCCGC CTCACTGGTC
CGCCCGGCAC TCACGACCGT CGCCCAGGAC CGCGTCAGCA TCGGCGTCGG CGCAGTCGAG
ACACTCCTGA CCGCCATCGG CTCCCCCGAC GACGACACCC GCGACGCGAA GCGGGACACG
CACCCGACGG CCGCCGCGCC GCTTCTCATC CCCACGCAGC TCATCGTGCG GGGGTCGTGC
GGGTCGGTGC GGTGA
 
Protein sequence
MVFPRERGPD TFPNVVDIRE LARRSGVSQA TVSRALNDRT EVSTETRRRI LELAEELGYT 
PNQPARTLVR RRSDMIGLLW DTGYANEGRR PAFLLDLFVG IKQALTAGGF HLMVLSVADT
AGVDAYLRAA RQHSLDGVIM MGVDEGHPAI TALVDSGIAC VGIDLPLQRK RTTYVTSDNR
SGAASAVRHL HSLGHRAIAT ITGPLPAMPA AERLAGYRYE MARVGLDPHP EYIEHGDFYL
SSGYECAQRL IALPEPPTAI FAAGDEMAIG AMQALHDAGI SVPADVAVVG FDDIEAASLV
RPALTTVAQD RVSIGVGAVE TLLTAIGSPD DDTRDAKRDT HPTAAAPLLI PTQLIVRGSC
GSVR