| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6615 |
|---|
| Symbol | |
|---|
| ID | 8337979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7625780 |
|---|
| End bp | 7627123 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644959709 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003117302 |
|---|
| Protein GI | 256395738 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.251672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACC GTGCCAGTGC CCTGACGTCC GCAACCGCTC GCGCGACCGA GCGTCTCGCC
ACAGCAGTGG CTCCCTCCAG CCCGCGCTAT CTGGCCGTGG CCACACTGGT CCGCCTAGCG
GACGGCGGCT CGACCGTCGC GCTGGTGACG CTGGCGATCT CGCTGCGTCA CGGCGCCGGA
GGGGCGAGCG GCGGCATACT CACAGCGCTG CTTACCGCGC CCCATCTCCT GGGCCCGGTG
GCCGCGGGCC CGCTGGCAAG AGCCAAAGAC CCCCGTCGGG TTCTGGCCGC GGCGTTCGCA
GGTTTCGGCA TATGCCTGGC GCTTTGTGGC GTCCTGCTGC AACACGGCCA CCTCATCCTC
GCAGCAGCGG CAGCTTGTAC CGCTGGCTGT AGCGGACCAC TGCTCACCGG CGGCTTGAGC
ACGCAAGTCA GCGCCCGCGC CGACGGCCTT GCGGAGCGAC AACCGGGGAC ACCGCCGACA
CCGCCGCTTG ATAAGAGTCC TGATATGCGG CGGGCAGAAG CCTGGGACGC GGCCACGTAC
GGCGTCGGGG CAACGCTGGG ACCCACTGTC GTGGCAGGAA TCGTGGCCCT CGCATCACCG
GTGGTCTCGG TCGTGGCGCT CGGGGGCGCG GCGGTGGCCG CCGCGTTCCT GACCCTGAGG
CTGCCGCGCG CCGCAGGGAC CGGGCGCTCG GAGGCCGCGC AGATGCCGAT GCGTAAGGTC
TTCGCGGCGA TCATGGCGGT TTCCGTACTC CGACGAACCC TCGCGGCCAC GGTGCTCGCA
GCCTTCGGCA CCGGCGGCCT GCTGGTGGCC GCGGTGGTCT TCGGCACCCG TCTGGGTGGT
CACACGGCCG ACGGAGCCAT GCTCGCCGCG GCCTTCGGCA TCGGGAGCCT CACCGGATCG
GCCGTGCTCA TCATGCGGCC GTTGCGCAGC GAACCGGAGT CCGCGATGGT CGCTCTGCTA
GCCGTCTCCG GCCTCCTGAT CGCCTTGTCC GCAGCCGCAC CCGATCTGGG CCTGGCAGCC
GCCGCCTTCG CATCCGCCGG CGCGGCATCA GCCGCCCAAT TCACCGCCAG CCTGGCAGTA
CGTTCCACCT ACGCCCCACC CGGCACCCGA GCCCACGTGT TCGTGACGAT GGCCGGCCTC
AAGATGGGCT GCTCAGCCCT CGGCGCAGCC GTCGTCGGCA CCGTCCTCAC CATCGGACCA
CGCCCCGCAC TGCTCCTGAT CGCCTCCCTC GTCCTCAGCG GCGCGCTGAT CGCGACCGTG
ATGAGGCGCC GGACTCGTTT CGGACCAGCG ACTCAGGACT CTGTCGTGCC AGCGGCGAAT
GTTCCGAACG CTCGTGTCCG CTAA
|
|---|
| Protein sequence | MTDRASALTS ATARATERLA TAVAPSSPRY LAVATLVRLA DGGSTVALVT LAISLRHGAG
GASGGILTAL LTAPHLLGPV AAGPLARAKD PRRVLAAAFA GFGICLALCG VLLQHGHLIL
AAAAACTAGC SGPLLTGGLS TQVSARADGL AERQPGTPPT PPLDKSPDMR RAEAWDAATY
GVGATLGPTV VAGIVALASP VVSVVALGGA AVAAAFLTLR LPRAAGTGRS EAAQMPMRKV
FAAIMAVSVL RRTLAATVLA AFGTGGLLVA AVVFGTRLGG HTADGAMLAA AFGIGSLTGS
AVLIMRPLRS EPESAMVALL AVSGLLIALS AAAPDLGLAA AAFASAGAAS AAQFTASLAV
RSTYAPPGTR AHVFVTMAGL KMGCSALGAA VVGTVLTIGP RPALLLIASL VLSGALIATV
MRRRTRFGPA TQDSVVPAAN VPNARVR
|
|---|
| |