Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6492 |
Symbol | |
ID | 8337856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7483019 |
End bp | 7483744 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644959590 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003117183 |
Protein GI | 256395619 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC GCAAAACCGC GCTGATCACC GGCTCCACCT CGGGCATCGG CCTGGCGGTG GCCCGCCGCC TGGCCGCCGA GGGCTGGCGG GTGGCGCTGA ACTCGGCGCG CTCGGCCGAG GCCGGCGCCG AACTGGCCGC CGAGCTGCCC GAGGCCGTCT ACCTGCGGGC CGACCTGGCC GCCCCCGGCG AGCCCGAACG GCTCGTCGCC GAGGCCGCCG AGGCGCTGGG CGGGCTGGAC CTGCTGGTCA ACAACGCCGG CCGCACGCAG CGGGTGGCGC ACGCCGACCT GGAGGGCGCG CCCCTGTCGC TGTGGCGGGA CGTGTTCGAG CTCAACGTCT TCGCCGCCTG GGCCGCGACC GTGGCCGCGG TGCCGTATCT GCGCGGCAGC GGCGGCAGCA TCATCAACGT GTCCTCGGTC GCCGGCGAGC GCCCGGCCGG CAGCAGCGTG CCCTACGCGG CCAGCAAGGC GGCGCTGGCC CACCTGACCC GGCTGCTGGC CAACGCGCTC GGCCCGGACA TCCGGGTCAA CGCGGTCGCG CCGGGGCTCA TCGACACGCC CTGGACCGCC GAGATGACCG ACATCCGCGA GCACGTCGAG GCCGCGGTCC CGCTGCGCCG CCTCGGCACC CCCGAGGACG TCGCCGACGC CGTCTGGGGT CTGATCGGCT CCGGCTACAC CACCGGCCAG GTGCTGCTCG CCGACGGCGG CGCCCACCTC ATCTAG
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Protein sequence | MTDRKTALIT GSTSGIGLAV ARRLAAEGWR VALNSARSAE AGAELAAELP EAVYLRADLA APGEPERLVA EAAEALGGLD LLVNNAGRTQ RVAHADLEGA PLSLWRDVFE LNVFAAWAAT VAAVPYLRGS GGSIINVSSV AGERPAGSSV PYAASKAALA HLTRLLANAL GPDIRVNAVA PGLIDTPWTA EMTDIREHVE AAVPLRRLGT PEDVADAVWG LIGSGYTTGQ VLLADGGAHL I
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