Gene Caci_6442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6442 
Symbol 
ID8337806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7434009 
End bp7434689 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content75% 
IMG OID644959542 
Productputative urease accessory protein 
Protein accessionYP_003117135 
Protein GI256395571 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0548041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.22219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTGG CCTCGCTGCT CATGCTGACC GACAGCCGCC TGCCCGCGGG CACGCACGCG 
CACTCGGGCG GGCTGGAGGC CGCCGTCGCC GCCGGGCGGG TCCTCGAGCC GGGCGACCTC
CACGCCTTCC TGCTCGGCCG GCTCACCACC ACCGGCCTGA CCGGAGCCGC CTTCTCGGCG
GCGGCGCTCG AAGCGGCTCG CGGACCGGAC GACGCGCTGC TCGCCGAGCT CGACGCCGAG
TACGAGGCGC GTACCCCCTC GCCCGCGCAA CGCCGCGCGT CCCGAACGCT GGGCCGGCAA
CTCCTGCGCG CGGTCCGCGC GGGCTGGCCG GGCCCGGCTC TGGCCGCGGC TTCCGCCGTG
CACCCGGACG GCCCCCACCA GCCGATCGCC TTCGGCGCGG CGGGTGTGAC CGCCGGTCTC
AGCGCGCACG ACGCCGCGCT CGCCTGCGCA CTCGGCGCCG TCAGCGGTCC GGCGAACGCC
GCCACCCGGC TCCTCGGCGT CGACCCCGAC GCGGTCACCC GGGTGCTCGC CGTGCTCGAA
CCCCACATCC AGGACACCGC TGACGCGGCG CTGAAAGCCG CGCTCGGCCC GATCAGCGAA
CTGCCATCGT TCAGCGCACC CCGTCTGGAC ATCTCGGCAG AACATCACAG CACATGGGAG
GTGCGTCTCT TTGCATCGTA A
 
Protein sequence
MNLASLLMLT DSRLPAGTHA HSGGLEAAVA AGRVLEPGDL HAFLLGRLTT TGLTGAAFSA 
AALEAARGPD DALLAELDAE YEARTPSPAQ RRASRTLGRQ LLRAVRAGWP GPALAAASAV
HPDGPHQPIA FGAAGVTAGL SAHDAALACA LGAVSGPANA ATRLLGVDPD AVTRVLAVLE
PHIQDTADAA LKAALGPISE LPSFSAPRLD ISAEHHSTWE VRLFAS