Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6442 |
Symbol | |
ID | 8337806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7434009 |
End bp | 7434689 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644959542 |
Product | putative urease accessory protein |
Protein accession | YP_003117135 |
Protein GI | 256395571 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0548041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.22219 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTGG CCTCGCTGCT CATGCTGACC GACAGCCGCC TGCCCGCGGG CACGCACGCG CACTCGGGCG GGCTGGAGGC CGCCGTCGCC GCCGGGCGGG TCCTCGAGCC GGGCGACCTC CACGCCTTCC TGCTCGGCCG GCTCACCACC ACCGGCCTGA CCGGAGCCGC CTTCTCGGCG GCGGCGCTCG AAGCGGCTCG CGGACCGGAC GACGCGCTGC TCGCCGAGCT CGACGCCGAG TACGAGGCGC GTACCCCCTC GCCCGCGCAA CGCCGCGCGT CCCGAACGCT GGGCCGGCAA CTCCTGCGCG CGGTCCGCGC GGGCTGGCCG GGCCCGGCTC TGGCCGCGGC TTCCGCCGTG CACCCGGACG GCCCCCACCA GCCGATCGCC TTCGGCGCGG CGGGTGTGAC CGCCGGTCTC AGCGCGCACG ACGCCGCGCT CGCCTGCGCA CTCGGCGCCG TCAGCGGTCC GGCGAACGCC GCCACCCGGC TCCTCGGCGT CGACCCCGAC GCGGTCACCC GGGTGCTCGC CGTGCTCGAA CCCCACATCC AGGACACCGC TGACGCGGCG CTGAAAGCCG CGCTCGGCCC GATCAGCGAA CTGCCATCGT TCAGCGCACC CCGTCTGGAC ATCTCGGCAG AACATCACAG CACATGGGAG GTGCGTCTCT TTGCATCGTA A
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Protein sequence | MNLASLLMLT DSRLPAGTHA HSGGLEAAVA AGRVLEPGDL HAFLLGRLTT TGLTGAAFSA AALEAARGPD DALLAELDAE YEARTPSPAQ RRASRTLGRQ LLRAVRAGWP GPALAAASAV HPDGPHQPIA FGAAGVTAGL SAHDAALACA LGAVSGPANA ATRLLGVDPD AVTRVLAVLE PHIQDTADAA LKAALGPISE LPSFSAPRLD ISAEHHSTWE VRLFAS
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