Gene Caci_6404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6404 
Symbol 
ID8337767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7374930 
End bp7375694 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID644959505 
Productbeta-phosphoglucomutase family hydrolase 
Protein accessionYP_003117099 
Protein GI256395535 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.929591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATG CAACGGAATC CACGAAGACC GGTCTGCCGG AACGGATCCG GGCGTGCTTG 
TTCGACCTCG ACGGCGTCCT CACCGAGACG GCGAAGGTGC ACGCCGCGGC GTGGAAGCAG
ATGTTCGACG CCTACCTGAA ATCGCGCCCC GGGCCGTTCG TGCCCTTCGA TCCCGTGGCG
GACTACGACC GGTACGTCGA CGGCAAGACC AGGTCCGACG GGACCCGGTC GTTCCTGGCG
TCGCGGAACA TCAACCTGCC GGACGGCTCC CCCGACGACC CGCCGGGCAC CGAGACGATC
AACGGTCTCG GCAACGCCAA GAACGAGATC GTGCTGAAGC TGCTCGACAC TCAGGGCGTC
CATGTCTACG AGGGCTCGGT CCGCTTCCTC AAGGCCGTGC GCGCGGCCGG GCTGCACCGG
GCGGTGGTCT CCTCCAGCGC CAACTGCGCC AACGTCCTGA AGGCGGCGGG GATCGACGAC
ATGTTCGAGG TCCGCATCGA CGGCGTGACG ATCGCCAAGG AGAACCTGCC GGGCAAACCC
GCCCCGGACA CCTACCTCGC CGCGGCCAAG AAGCTGGGTA TCGACCCCGA CCAGGCCGCG
GTCTTCGAGG ACGCGCTGGC CGGCGTGGAG GCCGGACGCT CCGGCGGCTT CGGGTTCGTC
GTGGGCGTCG ACCGGGTCGG GCAGGCCGAC GCCCTGCGCT CGTCCGGCGC CGACACTGTC
GTCACCGACC TGGCCGATCT CCTGAAGCAG GAAGACCAGG CATGA
 
Protein sequence
MDDATESTKT GLPERIRACL FDLDGVLTET AKVHAAAWKQ MFDAYLKSRP GPFVPFDPVA 
DYDRYVDGKT RSDGTRSFLA SRNINLPDGS PDDPPGTETI NGLGNAKNEI VLKLLDTQGV
HVYEGSVRFL KAVRAAGLHR AVVSSSANCA NVLKAAGIDD MFEVRIDGVT IAKENLPGKP
APDTYLAAAK KLGIDPDQAA VFEDALAGVE AGRSGGFGFV VGVDRVGQAD ALRSSGADTV
VTDLADLLKQ EDQA