| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6381 |
|---|
| Symbol | |
|---|
| ID | 8337744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7344429 |
|---|
| End bp | 7345229 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644959482 |
|---|
| Product | wyosine base formation |
|---|
| Protein accession | YP_003117076 |
|---|
| Protein GI | 256395512 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03084] conserved hypothetical protein TIGR03084 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0318909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0240218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAC AGAACGATGT GTACGCCGAC CTGGCCGCCG AGGGGGACGC GCTGGACACG
CTCGTCGCCG GCCTGGACGA CACCGGGTGG GCGACCCCGA CCCCCTCGCC CGGCTGGACG
ATCGGCAACC AGATAGCGCA CCTGGCCTTC ATCGCCCACC TGGCGGACCT GTCCTCCACC
GACCCCGAGG GGTTCGAGAC CGAGGCGGCG CCCTCCCGCG TGGACTTCCA GGGCTCGGTG
GACGCCAAGC TCGCCGAGTA CATGGACGAC AGCCGCGAGG GCATCCTGCA GCGCTGGCGC
GTCAACCGCG AGAAGGGCGT CAAGGGCCTG GCCGCGATGG ACGGCCAGAT GGTGCCCTGG
CTGCAGACCC CGCTGCCGTC CAACGTGCTC GCCACCGCCG GGATCATGGA GCTGTTCGGC
CACGGCCAGG ACGTCGCCGA CGCCCTGCAG GTCAAGCGCG AACGCACCGA CCGGATCGTC
CACCTGACCT ACTTCGGCCT GCTGACCCGG GCCTTCGGCT ACGTCGCGCA CGGCGAGGAG
CCGCCGACCG AGCCGGTCCG GCTGGAGCTG GTCGCCCCCT CCGGCGCCAA GTGGGTCTTC
GGCCCGGAGG ACTCCGCGGA GTACGTCACC GGCTCGGCCT GGGACTTCTG CCTGCTCATC
CTGCGCCGCC GGCACCGCGA CGACCTGGAC CTGACCGCCT ACGGCCCGGA GGCCTCGCAC
TGGCTGGACG TCGCCCAGGC CTACCGCGGC CCGGCCGGCG AGGGCCGCCG GCCCGGGCAG
TTCGCCGCGC TGGACGCCTG A
|
|---|
| Protein sequence | MTGQNDVYAD LAAEGDALDT LVAGLDDTGW ATPTPSPGWT IGNQIAHLAF IAHLADLSST
DPEGFETEAA PSRVDFQGSV DAKLAEYMDD SREGILQRWR VNREKGVKGL AAMDGQMVPW
LQTPLPSNVL ATAGIMELFG HGQDVADALQ VKRERTDRIV HLTYFGLLTR AFGYVAHGEE
PPTEPVRLEL VAPSGAKWVF GPEDSAEYVT GSAWDFCLLI LRRRHRDDLD LTAYGPEASH
WLDVAQAYRG PAGEGRRPGQ FAALDA
|
|---|
| |