| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6378 |
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| Symbol | |
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| ID | 8337741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7339522 |
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| End bp | 7341180 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959479 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003117073 |
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| Protein GI | 256395509 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.216955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG GGACCGTGGA GTCCACCGAT GTGCTGATCA TCGGCAGCGG GTTCGGCGGG
TCCATCCCCG CCTACCACCT GGCCGCCGGC GGCGCGCGCG TGATGGTGCT GGAGCGCGGG
CCGTGGCTGA ACCCCGAGGA GTTCGACCAC GACCTGCGGC TGGGCACGGC CTCGACCCGG
GTGTTCGAGT TCGTGGTCGG CCAGGGGATG AGCGTGCTGG GCGGCAACTG CGTCGGCGGC
GGCAGCGTGG TGTACTTCGC CGCCATGCCG CGCGCGCCGC GGTTCGTCTT CGAGCGGCAG
GGCTCGGTCG GGCACCGGCT GTGGCCGGCC TCGATCACCC GCGACTCGCT GGAGCCCTGG
TACGAGCGGG TGGAGGAGGC GCTGCCGATC AGCCCGGCGA GCTGGGAGAC CACCACCTAC
GCCGGCGGGC TGTGGGCTGC GGCCTGCAAC CACGCGGGGT GGACGTGCAA CCCGGTGCCC
GCGGCGGTCG ACTCCGACCT GTGCACCAAC TGCAACTGGA TGATGTCCGG CTGCCGGTTC
GACGCCAAGC GCTCGCTGCT GCTGAACTAC CTGCCGGCGG CGCTGGAGCA CGGCGCCGAG
ATCCGGCCGC TGCACGAGGT GCAGCAGATC ACCCGGCTCG ACGACGGCGG CTACCGCGTG
CACTACAACA CCGTCGACGA GGTCGACTAC CGGGTGGTGA CCGGCAGCGG GACGGTGGAC
GCCAAGGTCG TCATCGTGGC CGCCGGCGCC GGCGCCACCC CGGTGATCCT GCAGCGCTCC
GAGCCCGCGC TCGGCACGAT GCCGCACGCC GTGGGCCGGT ACTTCTCCGG CAACGGCGAG
CGGCTGAACA CCGCGGTGAT CGACGAGGAC AAGGCCCGCG ACCTGCTGGG CCTGGACCGC
GGTGACGGCC GGGCCTACGA GGGCTACCAG ATCGGCCGCG GACCGACGGT CGCCTCCTGG
GACCGGCTGG ACGGCTCGCT GCCGGAGTTC GAGCGCTACT CCCTGGAGCA GCTGTACTTC
CCGCCGGGCC TGGGCACCGT GCTGGCGCAG GTCCCCGGCG CCGAAGGGCC CAGCTGGTTC
GGCAAGGGCA AGAAGGAGCT GCTGCGGGAC TGGAAGTCCT GGCTGACCAT CTTCACCATG
TCCGAGGACG ACAACGAGGG GGTCTTCGGC CCGCCGCCGC CCACCGGCAA CGCCAACCGC
TTCTCCCAGC AGATGTTCGG CTTCGGCACG ATCGCCTACG AGCCGACGGC CAACACCCGG
CGCGGCTGGG AGAAGTCCGA CGCCGACGTG CGCGAGATCC TGGAGAAGGA CGGCCTGGCC
AAGGTCCTGC CCTGGACCAG CGACGTGATC GGCGCCTACA CGGTGCACCC GCTGGCCTCC
TGCCGGATCG GCGACAACCC GGAGACCTCG GCCCTGGACG ACCGGCACGA GCTGCGCGGC
CACCCGGGGA TCTTCGTCAC CGACGGCTCG GCGGTGCCGG CCGGGCTGAC GGTGAACCCG
GCGTTCACCA TCGCCGCGCT CGCCGAGCGC GCGGTGCCGG GGATCGTCGC GGCGCTGCAG
GCGCGCGGCG TCCAGGTCAC CTACGGCGCC CCGTCCCCGA CGGGCGCCGC CGCCGGACGC
CGGGCCACGC GCGACTTCGC GCGCGCCGCG GGGGTCTGA
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| Protein sequence | MTAGTVESTD VLIIGSGFGG SIPAYHLAAG GARVMVLERG PWLNPEEFDH DLRLGTASTR
VFEFVVGQGM SVLGGNCVGG GSVVYFAAMP RAPRFVFERQ GSVGHRLWPA SITRDSLEPW
YERVEEALPI SPASWETTTY AGGLWAAACN HAGWTCNPVP AAVDSDLCTN CNWMMSGCRF
DAKRSLLLNY LPAALEHGAE IRPLHEVQQI TRLDDGGYRV HYNTVDEVDY RVVTGSGTVD
AKVVIVAAGA GATPVILQRS EPALGTMPHA VGRYFSGNGE RLNTAVIDED KARDLLGLDR
GDGRAYEGYQ IGRGPTVASW DRLDGSLPEF ERYSLEQLYF PPGLGTVLAQ VPGAEGPSWF
GKGKKELLRD WKSWLTIFTM SEDDNEGVFG PPPPTGNANR FSQQMFGFGT IAYEPTANTR
RGWEKSDADV REILEKDGLA KVLPWTSDVI GAYTVHPLAS CRIGDNPETS ALDDRHELRG
HPGIFVTDGS AVPAGLTVNP AFTIAALAER AVPGIVAALQ ARGVQVTYGA PSPTGAAAGR
RATRDFARAA GV
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