Gene Caci_6364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6364 
Symbol 
ID8337727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7319940 
End bp7320692 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content72% 
IMG OID644959465 
ProductWyosine base formation domain protein 
Protein accessionYP_003117059 
Protein GI256395495 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03084] conserved hypothetical protein TIGR03084 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.24755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCAGCA GCGTGTACGC GGACTTGATC AGTGAGGGGG AGGAGCTGGA GGCGCTCGTC 
CCGCTCGACG AACGCTGGTA CTCCCAGACC CCCGCCCCCG GATGGACCGT GGGTCGCCAG
ATCGACCACA TGGCGGAGGT CGCTGCGATG GCGCGGTCCG CCGCGATGCC GCGCCCTATA
GCCGGCGCGA ACGGCTCCCC GCGGCGTCCG CTGGAATTGG TCGACGGTCC CGAGCAGACG
GTGCGCCGCT GGCGGACCGA GCGGGAAGCC GCGGCGCGCG CCTTGAGCGA AGCCGACCAG
GACCGCGATC TGCCCTGGAT GCGCGGCACG GGACGGCCCT CGCTGATCGG CGCCGCCTTG
GCGATGGAGA TGTTCGGCCA CGGACAGGAC ATCGTCGACA CCGTGGGGGA GAAGCGCACA
CACACCGACC GCATCGGGCA CGTCGTCTGG TTCGGCGCGC GCACCCGCGA CTTCGGCTAC
CGGGCCCACG GTTTCGAGGC GCCCGACAAG CCGTTCCGCT TCGAGATCAC CGCGCCGTCC
GGCAACCTGT GGGCGTTCGG GCCCGAAGAC GCCGAGCAGC GGGTGATCGC GCCAGCGGTG
GACTTCTGCC TGCTGGTCAC CTGCCGCCGG CACCGCGACG ACGTGGACGT CAAAGCGATC
GGCCGCGAGG CGGAACGCTG GCTGGGCATC GCGCAGTGCT ATCCGGGACC GGCCGGCGCG
GGCCGCAGCG CCGGCCAATT CGGAGGGCGC TGA
 
Protein sequence
MVSSVYADLI SEGEELEALV PLDERWYSQT PAPGWTVGRQ IDHMAEVAAM ARSAAMPRPI 
AGANGSPRRP LELVDGPEQT VRRWRTEREA AARALSEADQ DRDLPWMRGT GRPSLIGAAL
AMEMFGHGQD IVDTVGEKRT HTDRIGHVVW FGARTRDFGY RAHGFEAPDK PFRFEITAPS
GNLWAFGPED AEQRVIAPAV DFCLLVTCRR HRDDVDVKAI GREAERWLGI AQCYPGPAGA
GRSAGQFGGR