Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6198 |
Symbol | |
ID | 8337561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7133131 |
End bp | 7135533 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644959299 |
Product | putative phosphoketolase |
Protein accession | YP_003116893 |
Protein GI | 256395329 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.692341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTCGCC TCTCTCGACA ATCACCGCGC AAGAGCCCGC TGTCCGCCAA GGACCTCGAC GCCGTCAACG CCTATTGGCG TGCCGCCAAC TACCTGTCGG TGGGTCAGAT CTACCTGCTG GACAATCCGC TGATGCGCCG GCCGCTGAGC CTGGACGACG TCAAGCCGCG GCTGCTGGGC CACTGGGGCA CCACGCCGGG GCTGAACTTC ATCTACGCGC ACATGAACCG GGTCATCAAG GCGCGGGATC TGGACGCGAT CTACGTCGCC GGTCCCGGGC ACGGCGGTCC CGGCGTGCTG GCGAACGTCT ATCTGGAAGG CACGTACAGC GAGATCTACC CGGGGATCGG CCAGGACGAG GACGGGATGC GCAAGCTGTT CCGCCAGTTC TCCTTCCCCG GCGGTGTGCC CTCGCACGTC GCGCCGGAGA CGCCGGGCTC GATCCACGAG GGCGGCGAGC TGGGCTATTC CCTGGCGCAC GCCTACGGCG CGGCGTTCGA TAACCCGGAC CTGCTGGTGT GCGCGGTGGT CGGCGACGGC GAGGCGGAGA CCGGGCCGCT GGCCGCGTCG TGGCACTCGA ACAAGTTCGT CAACCCGGTG CGCGACGGCA CGGTGCTGCC GATCCTGCAC CTGAACGGCT ACAAGATCGC CAACCCGACC GTGCTGTCCC GCATCCCGCA GGCCGAGCTG GAGCAACTGA TGCGCGGGTA CGGCTACGAG CCGTTCACGG TCGTCAGCGA GGAGGGCGCC GATCCGCTGG AGGCGCACCA GGCGATGGCC GCCACGCTGG ACGCGATGCT GGACCGGATC GCCGACATCC GGACGCGCGC GCTCACCGGC CGAGACAACG GCGAGCGCCC GGCGTGGCCG ATGCTGATCC TGCGCACGCC GAAGGGCTGG ACCGGCCCGA AGACCGTCGA CGGCAAGCGC ACGGAGGACT CCTGGCGCTC GCACCAGGTG CCGATGGCCA ACGTGCACAC CAACCCGGCG CATCTGAAGG TGCTGGAGGA GTGGATGCGC TCCTACCGCC CGGAGGAGCT GTTCGACCCG GCCGGTGCGC TGATGCCGGA GTTGGCGGCG CTGGCGCCGT CCGGGCTGCG GCGGATGGGG GCGAACCCGC ACGCCAACGG CGGTGTGCTG CTGCGGGATC TGAAGATGCC GGACTTCCGC GACTACGCGG TCGAGCCGGC CGGGCACGGC GTCGAGCACG CGGAGTCCAC GAAGATCCTC GGCACGTTCC TGCGCGACAT CATGAGCGAC AATTCGGGTG CTGACAACTT CCGGGTCTTC GGGCCCGACG AGACGGCGTC CAACCGGCTG CAGGCGTTGT TCGAGGCGAC GGGCCGGATG TGGAACGCCG AGACGGTGCC GTGGGACGAC GAGCACCTGG CGCTGGACGG CCGGGTGCTG GAGCCGCTGA GCGAGCACAT GTGCCAGGGC TGGCTGGAGG GCTATCTGCT GACCGGGCGG CACGGGTTCT TCTCGTGCTA CGAGGCGTTC ATCCACATCG TGGACTCGAT GTTCAACCAG CACGCGAAGT GGCTGAAGAC GACCCGGCAC ATCCCCTGGC GGGCGCCGAT CGCCTCGCTG AACTACCTGC TGACCTCGCA CGTATGGCGG CAGGACCACA ACGGCTTCTC GCACCAGGAC CCGGGCTTCA TCGACCACGT CGTGAACAAG AAGGCGGACG TGATCCGCGT GTACCTGCCG CCGGACGCGA ACACGCTGCT GTCGGTGGCG GACCACTGCC TGCGCTCGCG GGACTACGTG AACGTCATCG TCGCGGGCAA GCAGCCGCAA CTCCAGTACC TGTCGATGGA AGAAGCGATC GTGCACTGCA CGCGCGGCAT CGGCATCTGG GAGTGGGCCT CCAGCGACGG CGACGGCGAG CCGGACCTGG TGATGGGCTG CGCCGGCGAC GTCCCGACGA TGGAGACCCT GGCCGCCGTG GACATCCTGC GCCAGAACTT CCCAGACCTG AAGGTCCGCG TGGTGAACGT CGTGGACCTC ATGCGCCTGC AGGGCAGCGA CGAACACCCG CACGGCCTGT CCGACAAGGA ATTCGACGCC CTGTTCACCA CCGCCAAGCC AGTGGTCTTC ACCTACCACG GCTACCCCTG GCTCATCCAC CGCCTGACCT ACCGCCGCAC CAACCACGGC AACCTCCACG TCCGCGGCTA CAAGGAGGAA GGCACCACCA CCACCCCCTT CGACATGGCC ATGCTGAACG ACATCGACCG CTACCACCTA GCCATCGACG CCATCGACCG CGTCCCCGGC CTCGCCGAAC GCGCCGGCCA CCTCCGCCAG CAACTCCTGG ACGCACGCCT GAAGGCACGC CAGTACACCC GCGAGTTCGG CGAGGACGAC CCGGCGATTT CGGGGTGGGC GTGGCCTTAC TGA
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Protein sequence | MTRLSRQSPR KSPLSAKDLD AVNAYWRAAN YLSVGQIYLL DNPLMRRPLS LDDVKPRLLG HWGTTPGLNF IYAHMNRVIK ARDLDAIYVA GPGHGGPGVL ANVYLEGTYS EIYPGIGQDE DGMRKLFRQF SFPGGVPSHV APETPGSIHE GGELGYSLAH AYGAAFDNPD LLVCAVVGDG EAETGPLAAS WHSNKFVNPV RDGTVLPILH LNGYKIANPT VLSRIPQAEL EQLMRGYGYE PFTVVSEEGA DPLEAHQAMA ATLDAMLDRI ADIRTRALTG RDNGERPAWP MLILRTPKGW TGPKTVDGKR TEDSWRSHQV PMANVHTNPA HLKVLEEWMR SYRPEELFDP AGALMPELAA LAPSGLRRMG ANPHANGGVL LRDLKMPDFR DYAVEPAGHG VEHAESTKIL GTFLRDIMSD NSGADNFRVF GPDETASNRL QALFEATGRM WNAETVPWDD EHLALDGRVL EPLSEHMCQG WLEGYLLTGR HGFFSCYEAF IHIVDSMFNQ HAKWLKTTRH IPWRAPIASL NYLLTSHVWR QDHNGFSHQD PGFIDHVVNK KADVIRVYLP PDANTLLSVA DHCLRSRDYV NVIVAGKQPQ LQYLSMEEAI VHCTRGIGIW EWASSDGDGE PDLVMGCAGD VPTMETLAAV DILRQNFPDL KVRVVNVVDL MRLQGSDEHP HGLSDKEFDA LFTTAKPVVF TYHGYPWLIH RLTYRRTNHG NLHVRGYKEE GTTTTPFDMA MLNDIDRYHL AIDAIDRVPG LAERAGHLRQ QLLDARLKAR QYTREFGEDD PAISGWAWPY
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