Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6178 |
Symbol | |
ID | 8337541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7111191 |
End bp | 7112366 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644959279 |
Product | Uroporphyrinogen III synthase HEM4 |
Protein accession | YP_003116873 |
Protein GI | 256395309 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.677803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCA CGACAACCGC ATCCGGCACA GCGGGTTCGC CGACCGTCAC TGAGGCCGGA CTGCTCCCCG AACCCCTGGT CGGCTGCGTC GTGGCGATCA CTTCCGACAG ACGCCGGGAG GAGTTGGGGG CGATACTGCG GCGGCGCGGC GCGGAGGTCA TGATGGCGCC GACCATGCGC ATCATCCCGC TGAGCGACGA CCGGGTCCTG CGGGCCGCGA CCGAGGAGTG CCTGCGCGAG CCGTTGGACT ACGCGGTGGC CACGACCGGC ATCGGGTGGC GCGCGTGGAT CTCGACCGCC GAGGGCTGGG GACTGGCCGA GCCGCTGACG GCGGTCCTGG GCTCGGCGAC GCTGGCCGCG CGCGGCCCGA AGGCGACCGG CGCGATCCGG CAGTGTGGGA TGCGCGAAAC CTATTCGCCG CCGTCGGAAT CCTCCACCGA GCTGCTGGCC TGGCTGCTCG CCCAGGACCT GGCCGGCACC CGCATCGCGG TGCAGCTGCA CGGCAGCGCC GACACCGCCT TCCTGGACGC CCTGCGCGGC GCCGGCGCGG AGGTAGTGCC CGTGCCGGTG TACCAGTGGG GCGCCCCGCA GGACACTGCC GCCGTCGGCC GCCTGGTCGA GGCGGTGGTG CGCCGGCAGG TGCACGCGGT GGCCTTCACC TCGGCGCCGG GCGCGGCGGC GTTCCTGGCA GCGGCCGAGA ACGACGGCAA CCTGCCCCGC GTCATAGACG CCATGCAGGC GGACGTCCTG GCAGCCTGCA TCGGCCCGGT CTGCGCGGCT CCCCTGGAGC CGCACGGCAT CACCCCGGTC TGGCCCGACC GCGGCCGCCT CGGCTCCCTG GCCCGCGTGA TCACCCAGGA ACTGCCCCCG CGCGTCCGCC GCAAGCTGAA CACCCCCGGC CGCGACATCG TGGTCCAGGG CAACGCAGTC CTGATCGACG GCCGCCCGGT CCCCCTGTCC CCCCTGCCCG CCGGCGTCCT GCGCGAGCTG GCCCGCCAAC CCGGCCGCGT CCTGAGCCGC GCCGAACTCC TCCGCCGCGT CTGGACCGGC ATGCGCCGCG ACGAGCACGC CGTCGAGGCG ACCGTCGCGC GCCTGCGCAC CTCGCTCGGC GAGCACGCGG ACGTGGTCGC GACGGTGACG AAGCGCGGGT ATCGGCTGGC GGTCGATCCG AGCTGA
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Protein sequence | MDTTTTASGT AGSPTVTEAG LLPEPLVGCV VAITSDRRRE ELGAILRRRG AEVMMAPTMR IIPLSDDRVL RAATEECLRE PLDYAVATTG IGWRAWISTA EGWGLAEPLT AVLGSATLAA RGPKATGAIR QCGMRETYSP PSESSTELLA WLLAQDLAGT RIAVQLHGSA DTAFLDALRG AGAEVVPVPV YQWGAPQDTA AVGRLVEAVV RRQVHAVAFT SAPGAAAFLA AAENDGNLPR VIDAMQADVL AACIGPVCAA PLEPHGITPV WPDRGRLGSL ARVITQELPP RVRRKLNTPG RDIVVQGNAV LIDGRPVPLS PLPAGVLREL ARQPGRVLSR AELLRRVWTG MRRDEHAVEA TVARLRTSLG EHADVVATVT KRGYRLAVDP S
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