Gene Caci_6169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6169 
Symbol 
ID8337532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7098563 
End bp7100353 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content69% 
IMG OID644959270 
Productcatalytic domain of components of various dehydrogenase complexes 
Protein accessionYP_003116864 
Protein GI256395300 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.166861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGGAC CGGTGACGGC CCGCGTATTC CTGCTCCCGG ACCTCGGGGA AGGACTGACC 
GAGGCCGAGA TCATCGCCTG GCACGTCACG GTGGGCGAGC ACGTCTCCGT CGACCAGGTG
GTCTGCGAGG TCGAGACGGC GAAGGCGTCG GTCGAGGTGC CGTGTCCTTA CGCCGGCGAG
GTCGTTGAAC TGCACGGGGC GGTCGGCGAC GTCGTCGACG TCGGCAAGCC GCTGATCAGC
ATCGCGGCGG CGGTGGTTGC GGCGGCTGGT GGTGGTGCTG GTGGTGCTGG TAGCTCAGAT
AACAGGCCCC AAGGATTGAA GGCGGCGCCT GAGGAGCCGG CGGATCGGGC TCGGCTTGAT
GCTGCGGCTC GGAACGGGGC GAAGATCGGC TCCGGTGGTA GCGCTGGCAG CGGCTCAGGG
AGCGGCTCCG GCAATGTGCT GGTGGGGTAC GGGACCGCCG AGAGCGGAGG GGTCCGGCGA
CGGCGCGTGG TGAGCGGGTT CGGTGGGCAC GGCGGCTCGC CTCGGGTGCA TGGCGCGCCG
GTTGCCGGGT CGGGCGATGG CGGCGCGGTG AGTAATGGTG CTGCGGGCAG TAGCGATGCT
GAGGGCAATG GCTCGGCGGG TGCTGGTGCT GCGAGCAGCG GTGCGACTAG TGGTGCTGAG
GGCCATGGCT CCGCGCATGG CACTGGTGCT GCGGGCAGTG GCTCGATGGG CAGCGGTGCG
GCTCGCGATG GTTCAGCGGA CAGTGCTGCG GCTCGCCACG TTTCAGCGGA CAGTGCTGCG
GCTCGTAATG GTTCAGCAGG CAGTGCTGCG GCTCGCAACG GTTCAGCGGG CGGTGGCTCC
GCATCATCTC CGAGTGCTGC GAAGGCCGTG CCCGCGCTGA GCGGTGCGGC TGTGCAGGAG
CGCTCTGGTG CGGCGCCTCG AATTGCGGTC GTGTCTCCTC TCGTGCGTCG GCTGGCGAAG
GAGGGTGGGC TCGACCTGGC TTCCGTGCAG GGGACCGGGC CTGAGGGCTT GATCATGCGG
CGGGATGTCG AGGCGGCGCT TGCTGCACCG GCTGCTGCTC CTGCGTCGCT GGCGCTGAGT
TCGAGTGCTG GTATCGCCGA GCTCGAGCGC GTGCCGTTGC GTGGTCTGCG CAAGACGGTC
GCGGAGAAGC TTTCTCGCTC TCGGCGTGAG ATCCCGGATG CGACGACGTG GGTCGATGTC
GATGCGACCG GCCTCATGGA GCTGCGTGCG GCGCTGAACA GGGACGCGTC GGCGCGCAAG
ATCAGTCTGC TGGCGGTGTT GGCGCGGATC TGTGTGGCGG GTCTGGCGCG GTATCCGGAG
CTGAACGCGA CGGTGGATGT GGAGCAGCAG GAGATCGTCC GCTACGCCGA CGTGAACCTC
GGCTTTGCGG CGCAGACAGA TCGCGGCTTG GTCGTACCTG TCGTCCATGG TGCGCACCGG
ATGTCGACCG AGGAGCTGGC GGCCGAGTTC GAGCGGCTGA CCGCTGCGGC TCGCGCCGGC
TCGCTGCCGC TGTCCGACCT GACCGGCTCG ACCTTCACCC TGAACAACTA CGGCGTCTAC
GGCGTCGACG GCTCCACCCC GATCCTGAAC CACCCCGAGG CGGCGATGCT CGGCGTGGGG
CGCATCGTGA AGAAGCCGTG GGTGGTCGCC GACGAGCTGG CGATCCGCCA GGTCACGCAG
CTGTCGTTCA CCTTCGACCA CCGCGTGTGC GACGGCGGCG TGGCCGGCGG CTTCCTACGC
TACGTCGCAG ACCTGGTCGA GGAGCCCGCA CGGTTGTTGC GGAGTCTGTA A
 
Protein sequence
MGGPVTARVF LLPDLGEGLT EAEIIAWHVT VGEHVSVDQV VCEVETAKAS VEVPCPYAGE 
VVELHGAVGD VVDVGKPLIS IAAAVVAAAG GGAGGAGSSD NRPQGLKAAP EEPADRARLD
AAARNGAKIG SGGSAGSGSG SGSGNVLVGY GTAESGGVRR RRVVSGFGGH GGSPRVHGAP
VAGSGDGGAV SNGAAGSSDA EGNGSAGAGA ASSGATSGAE GHGSAHGTGA AGSGSMGSGA
ARDGSADSAA ARHVSADSAA ARNGSAGSAA ARNGSAGGGS ASSPSAAKAV PALSGAAVQE
RSGAAPRIAV VSPLVRRLAK EGGLDLASVQ GTGPEGLIMR RDVEAALAAP AAAPASLALS
SSAGIAELER VPLRGLRKTV AEKLSRSRRE IPDATTWVDV DATGLMELRA ALNRDASARK
ISLLAVLARI CVAGLARYPE LNATVDVEQQ EIVRYADVNL GFAAQTDRGL VVPVVHGAHR
MSTEELAAEF ERLTAAARAG SLPLSDLTGS TFTLNNYGVY GVDGSTPILN HPEAAMLGVG
RIVKKPWVVA DELAIRQVTQ LSFTFDHRVC DGGVAGGFLR YVADLVEEPA RLLRSL