Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6169 |
Symbol | |
ID | 8337532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7098563 |
End bp | 7100353 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644959270 |
Product | catalytic domain of components of various dehydrogenase complexes |
Protein accession | YP_003116864 |
Protein GI | 256395300 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.166861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGAGGAC CGGTGACGGC CCGCGTATTC CTGCTCCCGG ACCTCGGGGA AGGACTGACC GAGGCCGAGA TCATCGCCTG GCACGTCACG GTGGGCGAGC ACGTCTCCGT CGACCAGGTG GTCTGCGAGG TCGAGACGGC GAAGGCGTCG GTCGAGGTGC CGTGTCCTTA CGCCGGCGAG GTCGTTGAAC TGCACGGGGC GGTCGGCGAC GTCGTCGACG TCGGCAAGCC GCTGATCAGC ATCGCGGCGG CGGTGGTTGC GGCGGCTGGT GGTGGTGCTG GTGGTGCTGG TAGCTCAGAT AACAGGCCCC AAGGATTGAA GGCGGCGCCT GAGGAGCCGG CGGATCGGGC TCGGCTTGAT GCTGCGGCTC GGAACGGGGC GAAGATCGGC TCCGGTGGTA GCGCTGGCAG CGGCTCAGGG AGCGGCTCCG GCAATGTGCT GGTGGGGTAC GGGACCGCCG AGAGCGGAGG GGTCCGGCGA CGGCGCGTGG TGAGCGGGTT CGGTGGGCAC GGCGGCTCGC CTCGGGTGCA TGGCGCGCCG GTTGCCGGGT CGGGCGATGG CGGCGCGGTG AGTAATGGTG CTGCGGGCAG TAGCGATGCT GAGGGCAATG GCTCGGCGGG TGCTGGTGCT GCGAGCAGCG GTGCGACTAG TGGTGCTGAG GGCCATGGCT CCGCGCATGG CACTGGTGCT GCGGGCAGTG GCTCGATGGG CAGCGGTGCG GCTCGCGATG GTTCAGCGGA CAGTGCTGCG GCTCGCCACG TTTCAGCGGA CAGTGCTGCG GCTCGTAATG GTTCAGCAGG CAGTGCTGCG GCTCGCAACG GTTCAGCGGG CGGTGGCTCC GCATCATCTC CGAGTGCTGC GAAGGCCGTG CCCGCGCTGA GCGGTGCGGC TGTGCAGGAG CGCTCTGGTG CGGCGCCTCG AATTGCGGTC GTGTCTCCTC TCGTGCGTCG GCTGGCGAAG GAGGGTGGGC TCGACCTGGC TTCCGTGCAG GGGACCGGGC CTGAGGGCTT GATCATGCGG CGGGATGTCG AGGCGGCGCT TGCTGCACCG GCTGCTGCTC CTGCGTCGCT GGCGCTGAGT TCGAGTGCTG GTATCGCCGA GCTCGAGCGC GTGCCGTTGC GTGGTCTGCG CAAGACGGTC GCGGAGAAGC TTTCTCGCTC TCGGCGTGAG ATCCCGGATG CGACGACGTG GGTCGATGTC GATGCGACCG GCCTCATGGA GCTGCGTGCG GCGCTGAACA GGGACGCGTC GGCGCGCAAG ATCAGTCTGC TGGCGGTGTT GGCGCGGATC TGTGTGGCGG GTCTGGCGCG GTATCCGGAG CTGAACGCGA CGGTGGATGT GGAGCAGCAG GAGATCGTCC GCTACGCCGA CGTGAACCTC GGCTTTGCGG CGCAGACAGA TCGCGGCTTG GTCGTACCTG TCGTCCATGG TGCGCACCGG ATGTCGACCG AGGAGCTGGC GGCCGAGTTC GAGCGGCTGA CCGCTGCGGC TCGCGCCGGC TCGCTGCCGC TGTCCGACCT GACCGGCTCG ACCTTCACCC TGAACAACTA CGGCGTCTAC GGCGTCGACG GCTCCACCCC GATCCTGAAC CACCCCGAGG CGGCGATGCT CGGCGTGGGG CGCATCGTGA AGAAGCCGTG GGTGGTCGCC GACGAGCTGG CGATCCGCCA GGTCACGCAG CTGTCGTTCA CCTTCGACCA CCGCGTGTGC GACGGCGGCG TGGCCGGCGG CTTCCTACGC TACGTCGCAG ACCTGGTCGA GGAGCCCGCA CGGTTGTTGC GGAGTCTGTA A
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Protein sequence | MGGPVTARVF LLPDLGEGLT EAEIIAWHVT VGEHVSVDQV VCEVETAKAS VEVPCPYAGE VVELHGAVGD VVDVGKPLIS IAAAVVAAAG GGAGGAGSSD NRPQGLKAAP EEPADRARLD AAARNGAKIG SGGSAGSGSG SGSGNVLVGY GTAESGGVRR RRVVSGFGGH GGSPRVHGAP VAGSGDGGAV SNGAAGSSDA EGNGSAGAGA ASSGATSGAE GHGSAHGTGA AGSGSMGSGA ARDGSADSAA ARHVSADSAA ARNGSAGSAA ARNGSAGGGS ASSPSAAKAV PALSGAAVQE RSGAAPRIAV VSPLVRRLAK EGGLDLASVQ GTGPEGLIMR RDVEAALAAP AAAPASLALS SSAGIAELER VPLRGLRKTV AEKLSRSRRE IPDATTWVDV DATGLMELRA ALNRDASARK ISLLAVLARI CVAGLARYPE LNATVDVEQQ EIVRYADVNL GFAAQTDRGL VVPVVHGAHR MSTEELAAEF ERLTAAARAG SLPLSDLTGS TFTLNNYGVY GVDGSTPILN HPEAAMLGVG RIVKKPWVVA DELAIRQVTQ LSFTFDHRVC DGGVAGGFLR YVADLVEEPA RLLRSL
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