Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6166 |
Symbol | |
ID | 8337529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7095155 |
End bp | 7096243 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644959267 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003116861 |
Protein GI | 256395297 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0220245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGAAA CGATGGAGAA GGTCGAGGAC ACCGGAGGGC GCGCGAGCCG GAACGGGGAT GTGTGGCCGG CTGCGGAACC GGGTCGGAGG CCGCGCGACG CGGCGGACAA GGTGCGCAAG GCGCACAAGG CGGCGGGCAA GCACACGGTC GCCGTCGCCG TCACCGAGGG CGCGCCGATC TTCGAGATCT CGATCCCGGT CGAGGTCTTC GGCCGCATCC GGCCGGGCAT GCCGGAACTC GGTTACGACG TCCGGATCTG CAACCCGGAA TCAGGGCCCG TATCCTCCAG CGGCTTCACC GCGCTCGCCG GCGACAGCTA CGCCGCGCTC CTCACCGCGG ACACGGTCAT CGTTCCTGCG GTCGGGGACA TCTACACCGA ACCGGCCGCG GACCTCGTCG CGGCGGTGCG CCAGGCGCAC GCGAACGGTG CGCGCGTGGC GTCCCTGTGC TCCGGCGCCT TTGTCCTGGC CGCCGCCGGG CTGCTCGACG GCCGCCGTGC GACCACGCAC TGGTATTACG CGCAGGAGTT CCGGAAGCGC TTCCCGGCTG TGGACCTCGA TCCTGCGGTG CTCTACATCG ACGACGGCGA CGTGCTCACC AGCGCGGGTA CGACTGCCGG GATCGACCTG TGCGTCGCCA TCGTCGCCGC CGATCACGGT GCGGACGTCG CCAACACCCT GTCCCGGCGT TTGGTGGCGC CGACGCACCG CAGCGGCGGG CAGGCGCAGT ATGTTGACAC GCCCGCGCCA TTGGCTCGGC GTGACAACCT CGGGCCGCTG CTGGACTGGA TGCGGACGCA CTTGGCGGAG ACGTTGACTG TTGCCGATTT GGCCCGGCAC GCGAACGTCG CCGAGCGGAC TTTGATCCGC CGCTTCCACA CCGCGGTCGG CACGACGCCC GGAAAATGGC TGACGGAGCA ACGGGTTCTG CACGCGCGCC GGCTCCTGGA AACCACAGAC CTGCCGGTAG ATCGTGTCGC CTCGGCGGCC GGGCTCGGCG GCGCGGCGAA TCTGCGGCAC CACTTCACCG AGGTGGTCGG GGTGGCGCCC AGCGACTACC GGCGCGCCTT CCGGCAGCCA GGAGTCTGA
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Protein sequence | MVETMEKVED TGGRASRNGD VWPAAEPGRR PRDAADKVRK AHKAAGKHTV AVAVTEGAPI FEISIPVEVF GRIRPGMPEL GYDVRICNPE SGPVSSSGFT ALAGDSYAAL LTADTVIVPA VGDIYTEPAA DLVAAVRQAH ANGARVASLC SGAFVLAAAG LLDGRRATTH WYYAQEFRKR FPAVDLDPAV LYIDDGDVLT SAGTTAGIDL CVAIVAADHG ADVANTLSRR LVAPTHRSGG QAQYVDTPAP LARRDNLGPL LDWMRTHLAE TLTVADLARH ANVAERTLIR RFHTAVGTTP GKWLTEQRVL HARRLLETTD LPVDRVASAA GLGGAANLRH HFTEVVGVAP SDYRRAFRQP GV
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