Gene Caci_6150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6150 
Symbol 
ID8337513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7077262 
End bp7078437 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content71% 
IMG OID644959251 
ProductCitrate (Si)-synthase 
Protein accessionYP_003116845 
Protein GI256395281 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.153659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAT CCGAGCAGCC TCGCCCCACG CGGAGCGTCA CCACCGTGGA AGTTCCGCGC 
GGTCTGGCCG GCGTCATCGT CACCGACACG AAAGTCGGCG ACGTGCGCGG TGAGGAAGGC
TTCTACCACT ACCGCCAGTA CAACGCGGTG GAGTTGGCGG AGAAGCGGAC CCTGGAGGAC
GTCTGGGTCC TGATGATCGA CGGCTACCTG CCGGACGCCG AGCAGCGGGC GGCCTTCATC
GCCGAGACCA CCCCGCTGCG GCACGTCCCG GACAAGGTCA AGGCCCTGCT GCCGGCCATC
GCCGAGGCGG TGCACGGCGA GCCGATGAAC GGCCTGCGGG CGGCGCTGCC GCTGCTGGCC
GGGCAGCGCG GAATGCGGCC GCTCTATGAC ATCGACGAGC AGACCCGGCG GGCCGACGCG
CTGTTCGTCA GCGCTCTGGC GCCGACGATC CTGACGGCGG TCCACCGGCT CGGCAAGGGC
CTGGAGATGG TGGAGCCGCG CGACGACCTG TCGTACGCGG CGAACTACCT CTACATGCTC
ACCGGCTCCG AGCCCACGGC CGAACAGGCC CGCGCGATCG AGCAGTACCT GATCTCGACC
GTGGACCACG GCTTCAACAA CTCCACGTTC ACCGCCCGCG TCATCGCCTC CACCGGCGCC
GACCTGGCCG CGGCCGTGAC CGGCGCGCTG GGCTCGCTGT CCGGCCCGCT GCACGGCGGC
GCGCCGTCGC GGGCACTGGA CACCCTGGAC GAGATCGGCA CCCCGGACAA GGCCGAGGAC
TGGGTCCGCG AACAGGTCGA GGCCGGCTCG CGGATCATGG GATTCGGCCA TCCGGTCTAC
CGCACGGACG ACCCGCGCTC GATCATGCTG CGCGGCGTCG CCCAGCGGCT CGGCGGCGAC
CTGGTGGACT TCGCCGTGGC CGTCGAGGAG CACGTGCTCA AGGCGCTCGC CGAGCTCAAG
CCCGGCCGCC AGCTCTACAC CAACGTCGAG TTCTACGCCG GCGTGGTGAT GGAGCTCTCC
GGCGTCCCGC GCGACATGTT CACCCCGACG TTCGCCACCT CCCGCGTCAT CGGCTGGTGC
GCGAACATCC TGGAGCAGGC GCAGGACTCG AAGATCATCC GCCCGGCGGC GCACTACTCC
GGCGTGTCGG CGCCGCAGCC GCTGCCGGAA GACTGA
 
Protein sequence
MLESEQPRPT RSVTTVEVPR GLAGVIVTDT KVGDVRGEEG FYHYRQYNAV ELAEKRTLED 
VWVLMIDGYL PDAEQRAAFI AETTPLRHVP DKVKALLPAI AEAVHGEPMN GLRAALPLLA
GQRGMRPLYD IDEQTRRADA LFVSALAPTI LTAVHRLGKG LEMVEPRDDL SYAANYLYML
TGSEPTAEQA RAIEQYLIST VDHGFNNSTF TARVIASTGA DLAAAVTGAL GSLSGPLHGG
APSRALDTLD EIGTPDKAED WVREQVEAGS RIMGFGHPVY RTDDPRSIML RGVAQRLGGD
LVDFAVAVEE HVLKALAELK PGRQLYTNVE FYAGVVMELS GVPRDMFTPT FATSRVIGWC
ANILEQAQDS KIIRPAAHYS GVSAPQPLPE D