Gene Caci_6126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6126 
SymbolcobN 
ID8337489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7048515 
End bp7052231 
Gene Length3717 bp 
Protein Length1238 aa 
Translation table11 
GC content72% 
IMG OID644959227 
Productcobaltochelatase subunit CobN 
Protein accessionYP_003116821 
Protein GI256395257 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases 
TIGRFAM ID[TIGR02257] cobaltochelatase, CobN subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.173021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00419275 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGCGC GCGTTCTGTT GCTGTCCACG GCCGACACCG AGCTCCTCGC CGCCCACGCG 
TGCGGCGCCC CCTACCGCAC CGCGAATCCC GCGCGTCTCG ACGCCGCCGC GCTCGCGCCC
CTGGTGGCCG ATGCCGACGT CGCCGTCGTG CGCCTGCTCG GCGGGCATCG GCCGTGGCGC
TGGCTCGTCG AGGCGATCAC CGCCAGCGGC CTGCCGGCTG TCGTGCTCGG CGGCGAGGCC
GTGCCGGACG CCGAACTCAT GGCGCTCTCG ACGGTCCCCG GCGGCGTGGT CGCCGAAGCC
CTCAACTACC TCACCGCCGG CGGTCCGGCG AACCTGGAGC AGCTGGCGAA CTTCCTCACC
GACACCGTCC TCGGCGGCGG CGAGGGTTTC GATGCGCCGC AAGCGATGCC CGAGTTCGGC
GTCCACGGCG GCCGCGAGCA GCGCGAGGAC CGCCCTACCG TCGGCATCGT CTTCTACCGG
GCGCATGAGC TCTCGGGTAA CACAGCGTTC GTAGACACCC TCGCTGACGC CCTCGAAACC
CGCGGCGCCA ACGCGCTTCC CGTCTACTGC GGCTCCCTGC GCGGGCTGTC GGACACGGCC
GGCGCCGGGC TCGTCGACCT CCTGCGCCGC TGCGACACGC TCGTCGTGAC CGTTCTGGCC
GGCGGCGGCG CCAACGCCGC GGACGCCAGC GCCGGCGGCG ACGAGGACGC CTGGGACGTC
GGCGCGCTCG CCGCCCTGGA CGTCCCAGTT ATCCAAGGAC TCTGTCTCAC CTCCTCGCGC
GAGGCATGGC AGGACTCTGA CGCGGCCCTC ACCCCGATGG ACGCCGCGAT GCAGGTCGCG
ATCCCGGAGT TCGACGGGCG CCTGATCGCT GTTCCCTTCT CCTTCAAGGA AAACGGCGAA
GCGGGCATCC CGGTCTACAC CGCCGATGAC GAACGCGCCG CGCGCCTGGC AGGCATCGCC
CACCGCCATG CCGCCCTGCG CAGCATCCCC AACCAGGACA AGAAGCTCGC GCTCGTCCTG
TCCTCCTACC CGACCAAGCA CTCGCGCGTC GGCAACGCCG TCGGGCTCGA CACGCCGGCC
AGCGCCGTCC GCCTGCTCAC CGCGCTGCGC GAAGCCGGCT ACACCGTCGG CGACTTCCCC
GAGGACGGCG ACCAGCTCAT CCACCGCCTC ATCGCGGCCG GCGGCCACGA CGTCGAATGG
CTCACCGAGG AGCAGCTGTC CGCAGCGCCG GCGCGCGTTC CGCTCAGTGA GTACGAGTCC
TGGTTCGCCA AGCTCCCAGA CGACCTGCGC GAGGGCATCC GGCAGCACTG GGGCGAGCCG
CCCGGGTCGC TGTATGTGGA CGGCGAGGAC ATCGTCCTGG CCTCGCTGCA GTTCGCGAAC
ATCCTGCTGA TGATCCAGCC GCCGCGCGGC TTCGGCGAGA ACCCCATCGC CATCTACCAC
GACCCCGACC TGCCGCCGAG CCACCATTAC CTGGCCGCCT ACCGATGGCT GGAGCACAGC
TTCGGCGCGG ACGCCGTCGT GCACCTCGGC AAGCACGGCA CGCTGGAATG GCTGCCCGGC
AAGGGATTGG GCTTGTCAGA GTCCTGCGCC CCGGACGCCG TCCTCGGCGA GCTGCCGCTG
GTCTATCCCT TCATCGTCAA CGACCCCGGC GAGGGTACGC AGGCCAAGCG GCGCGGGCAC
GCCACCGTCG TGGACCACCT GATGCCGCCG ATGGCGCGCG CCGACACCTA CGGCGACCTG
GCGAAGCTGG AGCAGCTGCT CGACGAGTAC GCGACCGTGC AGGCGCTGGA CCCGGACAAG
ACGCCGGCGG TGCGGGCGCA GATCTGGACC CTGATCCGCG CCGCGCAGCT GCACCACGAC
CTCGCCGCGA TCCTGCACGG GGACGTCGAG CACCCGCCCG CCGACGCCGA CTTCGACGAC
TTCGTGCTGC ACCTGGACGG GTACCTGTGC GAGATCAAGG ACGTGCAGAT CCGCGACGGG
CTGCACATCC TCGGGCGCGC GCCGGAGGGT GAGGAGCTGG TCGCCGACGT GCTGGCGATC
CTGCGCGCCA AGCAGGTCTT CGGCGGCGTG AACGGGGCGG TCACCGGGCT GCGGCAGGCG
CTGGCGGAGT ACGTCGGGCT CGACGAGCAG GTGCTGCTGG CCGAGCCGGG GGCGGCGGTG
AAGGTGCCGG AGCTGCTCGC GGAGCTGGCC GGGGACGTCC CGGCGCGGTC GGCGTCGGAT
GCCGTGGACA TGCTGGAGAC GCTGGCCCGG CGGCTGGTGG ACGCGCTGGC CGCGGCGGGC
TGGGATCCGG CGGCGGTACC AGAGGTCTGC GATGCGGTGC TCAGCGGTGT GGCTACGGCT
GCGGCTCGCA AGGTGGAACC GCAGGCAGCC GAAGGCATCG TCGCCGTCCT GCGCTTCGCC
GCCACCGAAC TCGTCCCGCG CCTGGCGCGC ACCACCGACG AGATCACCAA CGTTCTGCGC
GCCCTCGACG GCCGCTACAT CCCCGCCGGT CCCTCCGGGG CGCCGACGCG CGGGCTTGTC
AGTGTCCTGC CGACTGGTCG CAACTTCTAC TCGGTCGACC CGAAGGCCAT CCCCTCGCGC
AACGCCTGGG ACGTCGGGCA GGCGCTCGCC GAGTCGCTGA TCGCGCGCCA CCTCGCCGAC
ACCGGCGAGT ATCCGCGCTC GGTCGGTCTC ACCGTCTGGG GCACCTCGGC GATGCGTACG
CAGGGCGACG ACATCGCCGA GATCCTGCAT CTGCTGGGCT GCCGTCCGGT GTGGGACGAG
GCCTCGCGCC GGGTCACCGG CTTCGAGGTG GTGCCGGCCG CGGAGCTGGG ACGTCCGCGC
ATCGATGTGA CCGTCCGCAT CTCAGGGTTC TTCCGTGACG CGTTCCCGCA CGTCATCGCG
CTCATCGACG ACGCCGTCCA GGCTGTCGCA GACCTCGACG AAGGCGCCGA GGACAACTTC
GTGCGCGCGC ACGCCGCCAC CGACACCGCC GCGCACGGCG ACCGCCGCCG CGCCACCACC
CGCATCTTCG GCTCCAAGCC CGGTGCGTAC GGCGCCGGTC TGCTGCCGCT GATCGACGCC
CGCGACTGGC GCACCGACGC CGACCTCGCC GAGGTCTACG CCGTCTGGGG CGGCTACGCC
TACGGCCGCG GGCTGGACGG CCGCGAGGCG CGCGGGGACA TGGAGAACTC CTTCCGGCGC
ATCCAGGTCG CGGCGAAGAA CCAGGACAAC CGCGAGCACG ACATCGTCGA CTCCGACGAC
TACTTCCAGT ACCACGGCGG CATGGTCGCG ATGGTGCGCT CGCTGACCGG GACCTCCCCG
GCGGCCTACG TCGGCGACTC GGCGGTGCCG GAGGCTGTCA GGACTCGAAC ACTGGCCGAG
GAGACGCACC GCGTCTTCCG GGCCCGCGTG GTCAACCCGC GCTGGGTGGC GGCGATGCAG
CGCCACGGCT ACAAGGGCGC CTTCGAGCTG GCCGCGACCG TCGACTACCT GTTCGGCTAC
GACGCCACCG CCGGGGTCGT GGACGACTGG ATGTACGAGC AGCTGGCGCA GACCTACGTC
TTCGACGAGA CGAACCGCGC GTTCATGGAG CGCTCGAACC CGTGGGCGCT GCGCGGGATC
TCCGAGCGGC TGCTGGAGGC CGCCGAGCGC GGGCTGTGGG CCGAGCCGGA GGCGGAGACG
CTGGACGGGC TGCGCCAGGT GTTCCTGGAG CTGGAGGGGG AGCTCGAAGG GGAGTGA
 
Protein sequence
MPARVLLLST ADTELLAAHA CGAPYRTANP ARLDAAALAP LVADADVAVV RLLGGHRPWR 
WLVEAITASG LPAVVLGGEA VPDAELMALS TVPGGVVAEA LNYLTAGGPA NLEQLANFLT
DTVLGGGEGF DAPQAMPEFG VHGGREQRED RPTVGIVFYR AHELSGNTAF VDTLADALET
RGANALPVYC GSLRGLSDTA GAGLVDLLRR CDTLVVTVLA GGGANAADAS AGGDEDAWDV
GALAALDVPV IQGLCLTSSR EAWQDSDAAL TPMDAAMQVA IPEFDGRLIA VPFSFKENGE
AGIPVYTADD ERAARLAGIA HRHAALRSIP NQDKKLALVL SSYPTKHSRV GNAVGLDTPA
SAVRLLTALR EAGYTVGDFP EDGDQLIHRL IAAGGHDVEW LTEEQLSAAP ARVPLSEYES
WFAKLPDDLR EGIRQHWGEP PGSLYVDGED IVLASLQFAN ILLMIQPPRG FGENPIAIYH
DPDLPPSHHY LAAYRWLEHS FGADAVVHLG KHGTLEWLPG KGLGLSESCA PDAVLGELPL
VYPFIVNDPG EGTQAKRRGH ATVVDHLMPP MARADTYGDL AKLEQLLDEY ATVQALDPDK
TPAVRAQIWT LIRAAQLHHD LAAILHGDVE HPPADADFDD FVLHLDGYLC EIKDVQIRDG
LHILGRAPEG EELVADVLAI LRAKQVFGGV NGAVTGLRQA LAEYVGLDEQ VLLAEPGAAV
KVPELLAELA GDVPARSASD AVDMLETLAR RLVDALAAAG WDPAAVPEVC DAVLSGVATA
AARKVEPQAA EGIVAVLRFA ATELVPRLAR TTDEITNVLR ALDGRYIPAG PSGAPTRGLV
SVLPTGRNFY SVDPKAIPSR NAWDVGQALA ESLIARHLAD TGEYPRSVGL TVWGTSAMRT
QGDDIAEILH LLGCRPVWDE ASRRVTGFEV VPAAELGRPR IDVTVRISGF FRDAFPHVIA
LIDDAVQAVA DLDEGAEDNF VRAHAATDTA AHGDRRRATT RIFGSKPGAY GAGLLPLIDA
RDWRTDADLA EVYAVWGGYA YGRGLDGREA RGDMENSFRR IQVAAKNQDN REHDIVDSDD
YFQYHGGMVA MVRSLTGTSP AAYVGDSAVP EAVRTRTLAE ETHRVFRARV VNPRWVAAMQ
RHGYKGAFEL AATVDYLFGY DATAGVVDDW MYEQLAQTYV FDETNRAFME RSNPWALRGI
SERLLEAAER GLWAEPEAET LDGLRQVFLE LEGELEGE