Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6126 |
Symbol | cobN |
ID | 8337489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7048515 |
End bp | 7052231 |
Gene Length | 3717 bp |
Protein Length | 1238 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644959227 |
Product | cobaltochelatase subunit CobN |
Protein accession | YP_003116821 |
Protein GI | 256395257 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.173021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00419275 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGCGC GCGTTCTGTT GCTGTCCACG GCCGACACCG AGCTCCTCGC CGCCCACGCG TGCGGCGCCC CCTACCGCAC CGCGAATCCC GCGCGTCTCG ACGCCGCCGC GCTCGCGCCC CTGGTGGCCG ATGCCGACGT CGCCGTCGTG CGCCTGCTCG GCGGGCATCG GCCGTGGCGC TGGCTCGTCG AGGCGATCAC CGCCAGCGGC CTGCCGGCTG TCGTGCTCGG CGGCGAGGCC GTGCCGGACG CCGAACTCAT GGCGCTCTCG ACGGTCCCCG GCGGCGTGGT CGCCGAAGCC CTCAACTACC TCACCGCCGG CGGTCCGGCG AACCTGGAGC AGCTGGCGAA CTTCCTCACC GACACCGTCC TCGGCGGCGG CGAGGGTTTC GATGCGCCGC AAGCGATGCC CGAGTTCGGC GTCCACGGCG GCCGCGAGCA GCGCGAGGAC CGCCCTACCG TCGGCATCGT CTTCTACCGG GCGCATGAGC TCTCGGGTAA CACAGCGTTC GTAGACACCC TCGCTGACGC CCTCGAAACC CGCGGCGCCA ACGCGCTTCC CGTCTACTGC GGCTCCCTGC GCGGGCTGTC GGACACGGCC GGCGCCGGGC TCGTCGACCT CCTGCGCCGC TGCGACACGC TCGTCGTGAC CGTTCTGGCC GGCGGCGGCG CCAACGCCGC GGACGCCAGC GCCGGCGGCG ACGAGGACGC CTGGGACGTC GGCGCGCTCG CCGCCCTGGA CGTCCCAGTT ATCCAAGGAC TCTGTCTCAC CTCCTCGCGC GAGGCATGGC AGGACTCTGA CGCGGCCCTC ACCCCGATGG ACGCCGCGAT GCAGGTCGCG ATCCCGGAGT TCGACGGGCG CCTGATCGCT GTTCCCTTCT CCTTCAAGGA AAACGGCGAA GCGGGCATCC CGGTCTACAC CGCCGATGAC GAACGCGCCG CGCGCCTGGC AGGCATCGCC CACCGCCATG CCGCCCTGCG CAGCATCCCC AACCAGGACA AGAAGCTCGC GCTCGTCCTG TCCTCCTACC CGACCAAGCA CTCGCGCGTC GGCAACGCCG TCGGGCTCGA CACGCCGGCC AGCGCCGTCC GCCTGCTCAC CGCGCTGCGC GAAGCCGGCT ACACCGTCGG CGACTTCCCC GAGGACGGCG ACCAGCTCAT CCACCGCCTC ATCGCGGCCG GCGGCCACGA CGTCGAATGG CTCACCGAGG AGCAGCTGTC CGCAGCGCCG GCGCGCGTTC CGCTCAGTGA GTACGAGTCC TGGTTCGCCA AGCTCCCAGA CGACCTGCGC GAGGGCATCC GGCAGCACTG GGGCGAGCCG CCCGGGTCGC TGTATGTGGA CGGCGAGGAC ATCGTCCTGG CCTCGCTGCA GTTCGCGAAC ATCCTGCTGA TGATCCAGCC GCCGCGCGGC TTCGGCGAGA ACCCCATCGC CATCTACCAC GACCCCGACC TGCCGCCGAG CCACCATTAC CTGGCCGCCT ACCGATGGCT GGAGCACAGC TTCGGCGCGG ACGCCGTCGT GCACCTCGGC AAGCACGGCA CGCTGGAATG GCTGCCCGGC AAGGGATTGG GCTTGTCAGA GTCCTGCGCC CCGGACGCCG TCCTCGGCGA GCTGCCGCTG GTCTATCCCT TCATCGTCAA CGACCCCGGC GAGGGTACGC AGGCCAAGCG GCGCGGGCAC GCCACCGTCG TGGACCACCT GATGCCGCCG ATGGCGCGCG CCGACACCTA CGGCGACCTG GCGAAGCTGG AGCAGCTGCT CGACGAGTAC GCGACCGTGC AGGCGCTGGA CCCGGACAAG ACGCCGGCGG TGCGGGCGCA GATCTGGACC CTGATCCGCG CCGCGCAGCT GCACCACGAC CTCGCCGCGA TCCTGCACGG GGACGTCGAG CACCCGCCCG CCGACGCCGA CTTCGACGAC TTCGTGCTGC ACCTGGACGG GTACCTGTGC GAGATCAAGG ACGTGCAGAT CCGCGACGGG CTGCACATCC TCGGGCGCGC GCCGGAGGGT GAGGAGCTGG TCGCCGACGT GCTGGCGATC CTGCGCGCCA AGCAGGTCTT CGGCGGCGTG AACGGGGCGG TCACCGGGCT GCGGCAGGCG CTGGCGGAGT ACGTCGGGCT CGACGAGCAG GTGCTGCTGG CCGAGCCGGG GGCGGCGGTG AAGGTGCCGG AGCTGCTCGC GGAGCTGGCC GGGGACGTCC CGGCGCGGTC GGCGTCGGAT GCCGTGGACA TGCTGGAGAC GCTGGCCCGG CGGCTGGTGG ACGCGCTGGC CGCGGCGGGC TGGGATCCGG CGGCGGTACC AGAGGTCTGC GATGCGGTGC TCAGCGGTGT GGCTACGGCT GCGGCTCGCA AGGTGGAACC GCAGGCAGCC GAAGGCATCG TCGCCGTCCT GCGCTTCGCC GCCACCGAAC TCGTCCCGCG CCTGGCGCGC ACCACCGACG AGATCACCAA CGTTCTGCGC GCCCTCGACG GCCGCTACAT CCCCGCCGGT CCCTCCGGGG CGCCGACGCG CGGGCTTGTC AGTGTCCTGC CGACTGGTCG CAACTTCTAC TCGGTCGACC CGAAGGCCAT CCCCTCGCGC AACGCCTGGG ACGTCGGGCA GGCGCTCGCC GAGTCGCTGA TCGCGCGCCA CCTCGCCGAC ACCGGCGAGT ATCCGCGCTC GGTCGGTCTC ACCGTCTGGG GCACCTCGGC GATGCGTACG CAGGGCGACG ACATCGCCGA GATCCTGCAT CTGCTGGGCT GCCGTCCGGT GTGGGACGAG GCCTCGCGCC GGGTCACCGG CTTCGAGGTG GTGCCGGCCG CGGAGCTGGG ACGTCCGCGC ATCGATGTGA CCGTCCGCAT CTCAGGGTTC TTCCGTGACG CGTTCCCGCA CGTCATCGCG CTCATCGACG ACGCCGTCCA GGCTGTCGCA GACCTCGACG AAGGCGCCGA GGACAACTTC GTGCGCGCGC ACGCCGCCAC CGACACCGCC GCGCACGGCG ACCGCCGCCG CGCCACCACC CGCATCTTCG GCTCCAAGCC CGGTGCGTAC GGCGCCGGTC TGCTGCCGCT GATCGACGCC CGCGACTGGC GCACCGACGC CGACCTCGCC GAGGTCTACG CCGTCTGGGG CGGCTACGCC TACGGCCGCG GGCTGGACGG CCGCGAGGCG CGCGGGGACA TGGAGAACTC CTTCCGGCGC ATCCAGGTCG CGGCGAAGAA CCAGGACAAC CGCGAGCACG ACATCGTCGA CTCCGACGAC TACTTCCAGT ACCACGGCGG CATGGTCGCG ATGGTGCGCT CGCTGACCGG GACCTCCCCG GCGGCCTACG TCGGCGACTC GGCGGTGCCG GAGGCTGTCA GGACTCGAAC ACTGGCCGAG GAGACGCACC GCGTCTTCCG GGCCCGCGTG GTCAACCCGC GCTGGGTGGC GGCGATGCAG CGCCACGGCT ACAAGGGCGC CTTCGAGCTG GCCGCGACCG TCGACTACCT GTTCGGCTAC GACGCCACCG CCGGGGTCGT GGACGACTGG ATGTACGAGC AGCTGGCGCA GACCTACGTC TTCGACGAGA CGAACCGCGC GTTCATGGAG CGCTCGAACC CGTGGGCGCT GCGCGGGATC TCCGAGCGGC TGCTGGAGGC CGCCGAGCGC GGGCTGTGGG CCGAGCCGGA GGCGGAGACG CTGGACGGGC TGCGCCAGGT GTTCCTGGAG CTGGAGGGGG AGCTCGAAGG GGAGTGA
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Protein sequence | MPARVLLLST ADTELLAAHA CGAPYRTANP ARLDAAALAP LVADADVAVV RLLGGHRPWR WLVEAITASG LPAVVLGGEA VPDAELMALS TVPGGVVAEA LNYLTAGGPA NLEQLANFLT DTVLGGGEGF DAPQAMPEFG VHGGREQRED RPTVGIVFYR AHELSGNTAF VDTLADALET RGANALPVYC GSLRGLSDTA GAGLVDLLRR CDTLVVTVLA GGGANAADAS AGGDEDAWDV GALAALDVPV IQGLCLTSSR EAWQDSDAAL TPMDAAMQVA IPEFDGRLIA VPFSFKENGE AGIPVYTADD ERAARLAGIA HRHAALRSIP NQDKKLALVL SSYPTKHSRV GNAVGLDTPA SAVRLLTALR EAGYTVGDFP EDGDQLIHRL IAAGGHDVEW LTEEQLSAAP ARVPLSEYES WFAKLPDDLR EGIRQHWGEP PGSLYVDGED IVLASLQFAN ILLMIQPPRG FGENPIAIYH DPDLPPSHHY LAAYRWLEHS FGADAVVHLG KHGTLEWLPG KGLGLSESCA PDAVLGELPL VYPFIVNDPG EGTQAKRRGH ATVVDHLMPP MARADTYGDL AKLEQLLDEY ATVQALDPDK TPAVRAQIWT LIRAAQLHHD LAAILHGDVE HPPADADFDD FVLHLDGYLC EIKDVQIRDG LHILGRAPEG EELVADVLAI LRAKQVFGGV NGAVTGLRQA LAEYVGLDEQ VLLAEPGAAV KVPELLAELA GDVPARSASD AVDMLETLAR RLVDALAAAG WDPAAVPEVC DAVLSGVATA AARKVEPQAA EGIVAVLRFA ATELVPRLAR TTDEITNVLR ALDGRYIPAG PSGAPTRGLV SVLPTGRNFY SVDPKAIPSR NAWDVGQALA ESLIARHLAD TGEYPRSVGL TVWGTSAMRT QGDDIAEILH LLGCRPVWDE ASRRVTGFEV VPAAELGRPR IDVTVRISGF FRDAFPHVIA LIDDAVQAVA DLDEGAEDNF VRAHAATDTA AHGDRRRATT RIFGSKPGAY GAGLLPLIDA RDWRTDADLA EVYAVWGGYA YGRGLDGREA RGDMENSFRR IQVAAKNQDN REHDIVDSDD YFQYHGGMVA MVRSLTGTSP AAYVGDSAVP EAVRTRTLAE ETHRVFRARV VNPRWVAAMQ RHGYKGAFEL AATVDYLFGY DATAGVVDDW MYEQLAQTYV FDETNRAFME RSNPWALRGI SERLLEAAER GLWAEPEAET LDGLRQVFLE LEGELEGE
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