Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6096 |
Symbol | |
ID | 8337459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7016437 |
End bp | 7017762 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644959198 |
Product | protein of unknown function DUF901 |
Protein accession | YP_003116792 |
Protein GI | 256395228 |
COG category | [R] General function prediction only |
COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0632781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTCAC CAGAGGGCGA ACGTCTCACC ATCACACTGC CGGACTCGGT GCGCCAGCGC GTCGTGGAGA TCGCCTCCGA GGCGCTGGGC AAGATGCCGG CCGCGGAGAT CCCCGCGCCC TTGCGGCCCT TCGCCAAGTT CACTCCAGCC AAGCGGGCCA AAGCCGCGGC GATCCCCATG GCGGCGTCCT TGGAGAGCGA CGGAGCATTT CGTACGCGGG TCGCCGAACG TGTGCGCGAA GCATCCCCTG ACCTGTCCGA CTCCCTGTTC GCCGGGGTGG TACCGGCCGC CGCTGACCCG CACGAGGTCG CGGCGGTCGC TTATGTGCTG CGTCCGCACG GCTGGACCGG GATAGTCAAG GACGCCCTGG AGGCGGTGAC GCAGGGCGCG CGCCTGGCCG CCGGCGAGGC CGCCGAGAGC GAGGTCGCCC GGCTCGCCGC GGAGGTCGCG GAGCTGCGCG AGACGGCACG CGTCGCCGCC GACAGCCTGC GGGTCGCGCA GGAGGAGGCG CGCCGCGAGG GCGACCAGTT GCGGCGCAAG GTGCGGCAGC TGGAAGCGGA CATGCGGCGG GCCCAGGCCG CGGCGCGGGC GGCGGAGACG GCGCTGGAGA CGGAGCGGAC GTCGGCGGCC TCGGCCGCGT CGGCCTCAGA GGCCGAATTA AGGCGGCTGC GGACGCGCCT GACGGCCGCG GAGACCGCGC TGGACACCGC GCGCCGCTCG GCGCGCTCCG GGCGCTCTGA GGGGGATATG CGGCTGCGGC TGCTGCTGGA CACCGTGACC GGCGCGGTGA AGGGCTTGGA GCGCGAGCTG GCGCTGCCGC CGACCGAGAC CCGGCCGGCG GACACGGTCG GGGCGGCGTC TCCGGACTCT GTCGCGCCCT CGGACATGTC GGTGCAGGGG CGCGCCAAGG ACGATCCGGC GCTGCTGGAC CAGTACCTGG CGCTGCCGAT GGTGCACCTG GTGGTCGACG GCTACAACGT CACCAAGTCC GGCTATCCGA CGCTGCCGCT GGCCGAGCAG CGGGTGCGCC TGGTCGGCGG GCTGGCGGCG CTGGCCGCGC GCACCGGCGC GGAGGTGACG TGCGTCTTCG ACGGCGCGGC GCTGGACGGC CCGGTGCGGC TGACGCAGCC GCGCGGGGTG CGCGTGCTGT TCTCCGCGCC GGGGGAGATC GCCGACGAGC TGATCCGGCG GCTGGTGGCG GCCGAGCCCG CCGGGCGGCC GGTGGTGGTG GTGTCCTCGG ACCGCGAGGT GGCCGAGGGC GTGCGGCGGT CGGGGGCACG GCCGGTGCCG GCGTCGATGC TGCTGAACCG GATGGCGCGG TCCTGA
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Protein sequence | MSSPEGERLT ITLPDSVRQR VVEIASEALG KMPAAEIPAP LRPFAKFTPA KRAKAAAIPM AASLESDGAF RTRVAERVRE ASPDLSDSLF AGVVPAAADP HEVAAVAYVL RPHGWTGIVK DALEAVTQGA RLAAGEAAES EVARLAAEVA ELRETARVAA DSLRVAQEEA RREGDQLRRK VRQLEADMRR AQAAARAAET ALETERTSAA SAASASEAEL RRLRTRLTAA ETALDTARRS ARSGRSEGDM RLRLLLDTVT GAVKGLEREL ALPPTETRPA DTVGAASPDS VAPSDMSVQG RAKDDPALLD QYLALPMVHL VVDGYNVTKS GYPTLPLAEQ RVRLVGGLAA LAARTGAEVT CVFDGAALDG PVRLTQPRGV RVLFSAPGEI ADELIRRLVA AEPAGRPVVV VSSDREVAEG VRRSGARPVP ASMLLNRMAR S
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