Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6079 |
Symbol | |
ID | 8337442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7001425 |
End bp | 7002045 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644959182 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003116776 |
Protein GI | 256395212 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.615867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTATG CTCTGGGCAT GTCCGGTGTC AAGAGCAGGC GCGAGCAGTA CTCGGAAGCG ACGCGCGCGG CCCTGCTGGC CGCCGCCGCG CGCCGGTTCG CAGAGCACGG CTTCGCCGGC ACGGCGCTGG AGGACGTCGC CGCCGACATC CAGGCCACCC GCGGCGCGGT CTACCACCAC TTCGCCAACA AGACCGCGCT GTTCCGCGCG GTGCACGAAC AAGCCGAATC CGAGATGCTG CAACGCGTCG AGGCCGCCGC CGCGGTGCAC GCCGACGACG TGCGCGCCGC CGCCGGAGCC GCGCTGGAGG AGTTCCTCGA GTGCTGCTGC GAGCCGGAGT ACGGACGTCT GGTCTGGCAG GAAGCACCGG TGGCGCTGGG CTGGTCGGAG TGGCGGGCCA GCGAGGAGCA GTACGCCTTC GGGCTGATCG AGCGGACCAT CAAAGCCCTG ATCGACGCCG GAGCGCTGCC GCAGCTGCCG GCCGGCACGA TGGCGCGCGC GGTGTTCCAG CTGCTCGGCG CGGCCGGGAT CGAGCTGGCG CTGACGCCGG AGGCCGAGAA GGCCCGGGTC AAGGACGAGT ACACGCAAGT GCTGCGCTAC ATGCTCGGCG AAAAGGACTG A
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Protein sequence | MSYALGMSGV KSRREQYSEA TRAALLAAAA RRFAEHGFAG TALEDVAADI QATRGAVYHH FANKTALFRA VHEQAESEML QRVEAAAAVH ADDVRAAAGA ALEEFLECCC EPEYGRLVWQ EAPVALGWSE WRASEEQYAF GLIERTIKAL IDAGALPQLP AGTMARAVFQ LLGAAGIELA LTPEAEKARV KDEYTQVLRY MLGEKD
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