Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6067 |
Symbol | |
ID | 8337430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6988065 |
End bp | 6989912 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644959171 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003116765 |
Protein GI | 256395201 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGTGAGT TCAGCGTCCC GCCGCTCTAT GAGGTCGGCG CCACCGGCAA CCTGACCGAC GTGGTGCACA ACGCGGCCGA GAAGGCCCCG ACCGCGGCGC TGCTGGGCCG CAAGGTCGGC GGCGTGTGGC ACGACGTCAC CGCCAAGGAC TTCCTCGCCG AAGTCACCGC CCTGGCCAAG GGCATCGCCG CTTCCGGCAT CGCAGCCGGC GACCGTGTCG CCCTGATGTC CCGCACCCGC TATGAGTGGA CGCTGCTGGA CTTCGCGCTG TTCGAGGCCG GCGCGGTCGT CGTGCCCGTC TACGAGACCT CCTCGGCCGA GCAAGTCGAG TGGATCCTGT CGGACTCCGG CGCGGTCGCG GTGTTCGCCG AGACCAGCGA CAACGCCGCC TGCGTGGAGG TCGCCCGCAC CGGCGACACC CACTCCGACC TCGGCGGCGC GCCGAGCGTC CGGCAGGTCT GGGTGATCGA GCCGGACAGC GGCAAGGGCG CGGTCGAGGA ACTGACCGCC GCCGGCAGCG CGATCAGCGA CGAGGACCTG GCCGAGCGGC GCCGGGCGGC GACCCCGGAG TCGCTGGCCT CGATCATCTA CACCTCGGGC ACCACCGGCC GCCCCAAGGG CTGCGTGCTG ACCCACGGCA CGTTCCTCAG CGAGTGCGAG AACGTGACGC GCATGGCGTC CGCGGCGTTC AACGACTCCG GTTCGACGCT GCTGTTCCTG CCGCTGGCGC ACGTGCTGGC CCGCGTCATC CAGACCGCCG CGCTCACCGC GCGGGTGAAG CTGGCGCACT GTTCGGACAC CAAGAAGATC GTCGAGGAGC TCGGCAGCTT CAAGCCGACC TTCATCCTGT CGGTCCCGCG GGTGTTCGAG AAGGTCTACA ACGGCGCGTC GCAGAAGGCG CACGCCGAGG GCAAGGGCGC CATCTTCGAC AAGGCCGCCG CCACCGCGAT CGCCTGGTCG CGCGCCGAGT ACGCGGGCAA GGTCCCGATG GGCCTGAAGG TCAAGCACGC GGTGTTCGAC AAGCTGGTCT ACGGCAAGCT GCGCGCGGCC CTGGGCGGCA ACGCCACCCT GGCGGTCTCC GGCGGCGCGC CGCTGGGCAC CCGGCTGGTG CACTTCTTCC ACGGCATCGG CCTGCAGGTC CAGGAGGGCT ACGGCCTGAC CGAGACGTGC GCGGCGATCA CCTTGAACCC GATCGGCAAG TCCCGCCCCG GCACGGTCGG CGTCCCGGTC CCCGGCGCCT CGGTCCGCAT CGCCGAGGAC GGCGAGATCC TGGTCAAGGG CCCGATGGTG TTCTCCGGGT ACTTCCAGAA CGACACCGCC ACCGCCGAGT CGATGCGGGA CGGCTGGTTC GCCACCGGCG ACATCGGCTC CCTGGACGCC GAGGGCTACC TGTCGATCAC CGGCCGGAAG AAGGAGCTCC TGGTCACCGC TGGCGGCAAG AACGTCGCCC CGGCCGTCCT GGAGGACCGG ATCAACGCCC ACCCGCTGGT GAACCTGTCG ATGGTGGTCG GCGACAAGCA GCCGTTCATC GGCGCCCTGG TCACCCTGGA CCCGGAGTCC CTGCCGACCT GGGCCGCGGC CCACGGCAAG CCGGCGGACT GGTCGATCGC CGACGCCGCC GCCGACCCGG ACGTGCGCGC CGAGGTCCAG AAGGCGATCG ACGACGCGAA CCGCGCGGTG AGCCACGCCG AGGCGATCAA GAAGTTCACG GTGCTCGGCA CGGAGTGGAG CGTCGAGGGC GGGCAGGTGA CGCCGTCGAT GAAGCTCAAG CGGAACGTGG TGATGCAGGA GAACTCCTCG GACGTGGAGG AGCTGTACGC CGGGGTCGGG TCGACGACCG GACAGTGA
|
Protein sequence | MREFSVPPLY EVGATGNLTD VVHNAAEKAP TAALLGRKVG GVWHDVTAKD FLAEVTALAK GIAASGIAAG DRVALMSRTR YEWTLLDFAL FEAGAVVVPV YETSSAEQVE WILSDSGAVA VFAETSDNAA CVEVARTGDT HSDLGGAPSV RQVWVIEPDS GKGAVEELTA AGSAISDEDL AERRRAATPE SLASIIYTSG TTGRPKGCVL THGTFLSECE NVTRMASAAF NDSGSTLLFL PLAHVLARVI QTAALTARVK LAHCSDTKKI VEELGSFKPT FILSVPRVFE KVYNGASQKA HAEGKGAIFD KAAATAIAWS RAEYAGKVPM GLKVKHAVFD KLVYGKLRAA LGGNATLAVS GGAPLGTRLV HFFHGIGLQV QEGYGLTETC AAITLNPIGK SRPGTVGVPV PGASVRIAED GEILVKGPMV FSGYFQNDTA TAESMRDGWF ATGDIGSLDA EGYLSITGRK KELLVTAGGK NVAPAVLEDR INAHPLVNLS MVVGDKQPFI GALVTLDPES LPTWAAAHGK PADWSIADAA ADPDVRAEVQ KAIDDANRAV SHAEAIKKFT VLGTEWSVEG GQVTPSMKLK RNVVMQENSS DVEELYAGVG STTGQ
|
| |