Gene Caci_6067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6067 
Symbol 
ID8337430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6988065 
End bp6989912 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content71% 
IMG OID644959171 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003116765 
Protein GI256395201 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGAGT TCAGCGTCCC GCCGCTCTAT GAGGTCGGCG CCACCGGCAA CCTGACCGAC 
GTGGTGCACA ACGCGGCCGA GAAGGCCCCG ACCGCGGCGC TGCTGGGCCG CAAGGTCGGC
GGCGTGTGGC ACGACGTCAC CGCCAAGGAC TTCCTCGCCG AAGTCACCGC CCTGGCCAAG
GGCATCGCCG CTTCCGGCAT CGCAGCCGGC GACCGTGTCG CCCTGATGTC CCGCACCCGC
TATGAGTGGA CGCTGCTGGA CTTCGCGCTG TTCGAGGCCG GCGCGGTCGT CGTGCCCGTC
TACGAGACCT CCTCGGCCGA GCAAGTCGAG TGGATCCTGT CGGACTCCGG CGCGGTCGCG
GTGTTCGCCG AGACCAGCGA CAACGCCGCC TGCGTGGAGG TCGCCCGCAC CGGCGACACC
CACTCCGACC TCGGCGGCGC GCCGAGCGTC CGGCAGGTCT GGGTGATCGA GCCGGACAGC
GGCAAGGGCG CGGTCGAGGA ACTGACCGCC GCCGGCAGCG CGATCAGCGA CGAGGACCTG
GCCGAGCGGC GCCGGGCGGC GACCCCGGAG TCGCTGGCCT CGATCATCTA CACCTCGGGC
ACCACCGGCC GCCCCAAGGG CTGCGTGCTG ACCCACGGCA CGTTCCTCAG CGAGTGCGAG
AACGTGACGC GCATGGCGTC CGCGGCGTTC AACGACTCCG GTTCGACGCT GCTGTTCCTG
CCGCTGGCGC ACGTGCTGGC CCGCGTCATC CAGACCGCCG CGCTCACCGC GCGGGTGAAG
CTGGCGCACT GTTCGGACAC CAAGAAGATC GTCGAGGAGC TCGGCAGCTT CAAGCCGACC
TTCATCCTGT CGGTCCCGCG GGTGTTCGAG AAGGTCTACA ACGGCGCGTC GCAGAAGGCG
CACGCCGAGG GCAAGGGCGC CATCTTCGAC AAGGCCGCCG CCACCGCGAT CGCCTGGTCG
CGCGCCGAGT ACGCGGGCAA GGTCCCGATG GGCCTGAAGG TCAAGCACGC GGTGTTCGAC
AAGCTGGTCT ACGGCAAGCT GCGCGCGGCC CTGGGCGGCA ACGCCACCCT GGCGGTCTCC
GGCGGCGCGC CGCTGGGCAC CCGGCTGGTG CACTTCTTCC ACGGCATCGG CCTGCAGGTC
CAGGAGGGCT ACGGCCTGAC CGAGACGTGC GCGGCGATCA CCTTGAACCC GATCGGCAAG
TCCCGCCCCG GCACGGTCGG CGTCCCGGTC CCCGGCGCCT CGGTCCGCAT CGCCGAGGAC
GGCGAGATCC TGGTCAAGGG CCCGATGGTG TTCTCCGGGT ACTTCCAGAA CGACACCGCC
ACCGCCGAGT CGATGCGGGA CGGCTGGTTC GCCACCGGCG ACATCGGCTC CCTGGACGCC
GAGGGCTACC TGTCGATCAC CGGCCGGAAG AAGGAGCTCC TGGTCACCGC TGGCGGCAAG
AACGTCGCCC CGGCCGTCCT GGAGGACCGG ATCAACGCCC ACCCGCTGGT GAACCTGTCG
ATGGTGGTCG GCGACAAGCA GCCGTTCATC GGCGCCCTGG TCACCCTGGA CCCGGAGTCC
CTGCCGACCT GGGCCGCGGC CCACGGCAAG CCGGCGGACT GGTCGATCGC CGACGCCGCC
GCCGACCCGG ACGTGCGCGC CGAGGTCCAG AAGGCGATCG ACGACGCGAA CCGCGCGGTG
AGCCACGCCG AGGCGATCAA GAAGTTCACG GTGCTCGGCA CGGAGTGGAG CGTCGAGGGC
GGGCAGGTGA CGCCGTCGAT GAAGCTCAAG CGGAACGTGG TGATGCAGGA GAACTCCTCG
GACGTGGAGG AGCTGTACGC CGGGGTCGGG TCGACGACCG GACAGTGA
 
Protein sequence
MREFSVPPLY EVGATGNLTD VVHNAAEKAP TAALLGRKVG GVWHDVTAKD FLAEVTALAK 
GIAASGIAAG DRVALMSRTR YEWTLLDFAL FEAGAVVVPV YETSSAEQVE WILSDSGAVA
VFAETSDNAA CVEVARTGDT HSDLGGAPSV RQVWVIEPDS GKGAVEELTA AGSAISDEDL
AERRRAATPE SLASIIYTSG TTGRPKGCVL THGTFLSECE NVTRMASAAF NDSGSTLLFL
PLAHVLARVI QTAALTARVK LAHCSDTKKI VEELGSFKPT FILSVPRVFE KVYNGASQKA
HAEGKGAIFD KAAATAIAWS RAEYAGKVPM GLKVKHAVFD KLVYGKLRAA LGGNATLAVS
GGAPLGTRLV HFFHGIGLQV QEGYGLTETC AAITLNPIGK SRPGTVGVPV PGASVRIAED
GEILVKGPMV FSGYFQNDTA TAESMRDGWF ATGDIGSLDA EGYLSITGRK KELLVTAGGK
NVAPAVLEDR INAHPLVNLS MVVGDKQPFI GALVTLDPES LPTWAAAHGK PADWSIADAA
ADPDVRAEVQ KAIDDANRAV SHAEAIKKFT VLGTEWSVEG GQVTPSMKLK RNVVMQENSS
DVEELYAGVG STTGQ