Gene Caci_6050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6050 
Symbol 
ID8337413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6972341 
End bp6973669 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content74% 
IMG OID644959154 
Producthistidine kinase 
Protein accessionYP_003116748 
Protein GI256395184 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC AGCCGCCGCA GCCGCCCTCG CGCCCCTGGC TGGCGTGGCT GTGGGTGGAG 
CGCTCGACGG TCGGGCTGCC GCTGATCGTG CTGGTCATCG ACGTGTTCGG GACCTGGGGC
GCCTACGGCC ACTGGCACAA CCAGGGCGGG AGCACGCAGG TCGACGTCCG GCCGCTGGAC
TGGTTCGCCT GGCTCCTGGT GGTCGCCGGT CCGATCGCGC TGTGGCACCG GCGCAAGGCG
CCGCGCGTCG CCTTCGCGGT CTGCCTCGGC GCCACCCTGC TCTACCTGCT GATGGGTTAC
GCCACCGGCC CGATCTACCT GAACGCGCTG CTCGCGGTGA TCGTCATCGG CGGCACCGGC
TACCGGCGCG AGGTGTGGGC CGGGTCGCTG CTGTTCGCGA TCGGGATGAT CTTCGTGCCG
ACGCACGCCC ACGTCGGCGA GAAACGCAAC AGCCCGGCCG ACATCCTGTT CACCGCCGGC
TGGCTGCTGG CGCTGCTGAT GCTCGCCGAG CTGTTCGGGC TGCTGCGCCA GCGCGCGCTG
GAGGCGCAGA AGGCCCGGGA CCAGGAGGCC AGAGCCCGGG AGCAGGAGTC CCGGCGGCAG
GCCAGCGAGG AGCGGCTGGA GATCGCCCGG GAGCTGCACG ACGTGCTGGC GCACTCCATC
TCGCTGATCG CGGTGCAGGC GAACGTGGCG CTGGAGGTCA TGGACCGGCG CCCCGAGCAG
GCCCGGATCG CGCTGTCGGC GATCAAGGAC GCCAGCCGCT CGGCGCTGGG GGAGGTGCGC
TCGGTGCTGA CCGTGCTGCG CGGCGACCGG GCCGCGCCCC GCGATCCGGC ACCGGACCTG
GGACGGCTGG GGCACCTGGT GGAGCTCGCC GAGGCCGCCG GGCTGAAGGT CGCGCTCAGC
GTGGTCGGCG ACCTGGAGGC GGTGCCGCTG GCGGTGAGCC AGGCCGGCTA CCGGATCATC
CAGGAGTCGC TGACCAACGT GGTCCGGCAC GCCGCCGCCG GGCGCGCGAC GATCCTGGTG
GAGGCCGCCG GCGGCCTGCA CCTGCGGATC GCCGACGACG GCCGGGGCTG CCCGCTCGGG
GAGCCCGGCG CCGGCGGCAA CGGCCTGCCG GGGATGCGCG AGCGCGCCAC GGCCTTCGGC
GGCACGCTCA CCGCCGGACC GCAGTCCGGC GGCGGCTTCC GGGTCGACGC GCACATCCCG
TTCGGCGCCT TGCTCGGCAA TGCCGGCAGT AACGCCGACG GCAACGCCGA CGCCGACGCC
GTAATAGTTA CTGACACCGC CCCCACCCTC ACCCCCACCG CCGAAGACCA TGCCGAGGAG
CCGACATGA
 
Protein sequence
MTDQPPQPPS RPWLAWLWVE RSTVGLPLIV LVIDVFGTWG AYGHWHNQGG STQVDVRPLD 
WFAWLLVVAG PIALWHRRKA PRVAFAVCLG ATLLYLLMGY ATGPIYLNAL LAVIVIGGTG
YRREVWAGSL LFAIGMIFVP THAHVGEKRN SPADILFTAG WLLALLMLAE LFGLLRQRAL
EAQKARDQEA RAREQESRRQ ASEERLEIAR ELHDVLAHSI SLIAVQANVA LEVMDRRPEQ
ARIALSAIKD ASRSALGEVR SVLTVLRGDR AAPRDPAPDL GRLGHLVELA EAAGLKVALS
VVGDLEAVPL AVSQAGYRII QESLTNVVRH AAAGRATILV EAAGGLHLRI ADDGRGCPLG
EPGAGGNGLP GMRERATAFG GTLTAGPQSG GGFRVDAHIP FGALLGNAGS NADGNADADA
VIVTDTAPTL TPTAEDHAEE PT