Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6050 |
Symbol | |
ID | 8337413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6972341 |
End bp | 6973669 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644959154 |
Product | histidine kinase |
Protein accession | YP_003116748 |
Protein GI | 256395184 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC AGCCGCCGCA GCCGCCCTCG CGCCCCTGGC TGGCGTGGCT GTGGGTGGAG CGCTCGACGG TCGGGCTGCC GCTGATCGTG CTGGTCATCG ACGTGTTCGG GACCTGGGGC GCCTACGGCC ACTGGCACAA CCAGGGCGGG AGCACGCAGG TCGACGTCCG GCCGCTGGAC TGGTTCGCCT GGCTCCTGGT GGTCGCCGGT CCGATCGCGC TGTGGCACCG GCGCAAGGCG CCGCGCGTCG CCTTCGCGGT CTGCCTCGGC GCCACCCTGC TCTACCTGCT GATGGGTTAC GCCACCGGCC CGATCTACCT GAACGCGCTG CTCGCGGTGA TCGTCATCGG CGGCACCGGC TACCGGCGCG AGGTGTGGGC CGGGTCGCTG CTGTTCGCGA TCGGGATGAT CTTCGTGCCG ACGCACGCCC ACGTCGGCGA GAAACGCAAC AGCCCGGCCG ACATCCTGTT CACCGCCGGC TGGCTGCTGG CGCTGCTGAT GCTCGCCGAG CTGTTCGGGC TGCTGCGCCA GCGCGCGCTG GAGGCGCAGA AGGCCCGGGA CCAGGAGGCC AGAGCCCGGG AGCAGGAGTC CCGGCGGCAG GCCAGCGAGG AGCGGCTGGA GATCGCCCGG GAGCTGCACG ACGTGCTGGC GCACTCCATC TCGCTGATCG CGGTGCAGGC GAACGTGGCG CTGGAGGTCA TGGACCGGCG CCCCGAGCAG GCCCGGATCG CGCTGTCGGC GATCAAGGAC GCCAGCCGCT CGGCGCTGGG GGAGGTGCGC TCGGTGCTGA CCGTGCTGCG CGGCGACCGG GCCGCGCCCC GCGATCCGGC ACCGGACCTG GGACGGCTGG GGCACCTGGT GGAGCTCGCC GAGGCCGCCG GGCTGAAGGT CGCGCTCAGC GTGGTCGGCG ACCTGGAGGC GGTGCCGCTG GCGGTGAGCC AGGCCGGCTA CCGGATCATC CAGGAGTCGC TGACCAACGT GGTCCGGCAC GCCGCCGCCG GGCGCGCGAC GATCCTGGTG GAGGCCGCCG GCGGCCTGCA CCTGCGGATC GCCGACGACG GCCGGGGCTG CCCGCTCGGG GAGCCCGGCG CCGGCGGCAA CGGCCTGCCG GGGATGCGCG AGCGCGCCAC GGCCTTCGGC GGCACGCTCA CCGCCGGACC GCAGTCCGGC GGCGGCTTCC GGGTCGACGC GCACATCCCG TTCGGCGCCT TGCTCGGCAA TGCCGGCAGT AACGCCGACG GCAACGCCGA CGCCGACGCC GTAATAGTTA CTGACACCGC CCCCACCCTC ACCCCCACCG CCGAAGACCA TGCCGAGGAG CCGACATGA
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Protein sequence | MTDQPPQPPS RPWLAWLWVE RSTVGLPLIV LVIDVFGTWG AYGHWHNQGG STQVDVRPLD WFAWLLVVAG PIALWHRRKA PRVAFAVCLG ATLLYLLMGY ATGPIYLNAL LAVIVIGGTG YRREVWAGSL LFAIGMIFVP THAHVGEKRN SPADILFTAG WLLALLMLAE LFGLLRQRAL EAQKARDQEA RAREQESRRQ ASEERLEIAR ELHDVLAHSI SLIAVQANVA LEVMDRRPEQ ARIALSAIKD ASRSALGEVR SVLTVLRGDR AAPRDPAPDL GRLGHLVELA EAAGLKVALS VVGDLEAVPL AVSQAGYRII QESLTNVVRH AAAGRATILV EAAGGLHLRI ADDGRGCPLG EPGAGGNGLP GMRERATAFG GTLTAGPQSG GGFRVDAHIP FGALLGNAGS NADGNADADA VIVTDTAPTL TPTAEDHAEE PT
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