| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6049 |
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| Symbol | |
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| ID | 8337412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6971670 |
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| End bp | 6972344 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959153 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003116747 |
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| Protein GI | 256395183 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.764436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAGGG TCCTGCTCGC CGACGACCAG GCGCTGGTCC GCGCCGGCTT CCGCGCGCTG
CTGGAGGTGC AGGACGGCAT CGAGGTGGCC GGGGAGGCCG CCGACGGCGC CGAGGCGCAC
CGCCTGGCCG CCGAGCTGGC GCCCGACGTG ATCCTGATGG ACATCCGCAT GCCCGGCACC
GACGGGCTGG AGGCCACCCG CCTGATCACG GCCGACGAGA AGCTCTCCGG CGTCCGCATC
CTGATCCTGA CCACCTTCGA GCTGGACGAG TACGTCTTCG AGGCGATCCG CGCCGGCGCC
AGCGGCTTCC TGCTCAAGGA CACCGAACCC GCCGACCTGC TGCGCGGGCT GCGCGCGGTG
GCCGCCGGCG AGGCCCTGCT GGCGCCGAGC GTCACCCGCC GGCTGATCGC GGAGTTCGCC
GTCCGCAGCA AGCGCACCGG TCCCAACCCC GCCGCCGAGC AGATCAAAGC CCTGACAGAG
CGCGAGCGCG AAGTGCTGGC GCTGGTCGCC GCCGGGCTGA GCAACGAGGA GATCGCCGAC
CGCCTCGTGC TCAGCCCGCT GACCGCGAAG ACGCACGTCA GCCGCAGTAT GGTCAAGCTC
GGCGCGCGCG ACCGGGCACA GCTGGTGGTC CTGGCCTACG AGTCCGGACT GGCCCGTCCC
GGCTGGCTCG ACTGA
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| Protein sequence | MIRVLLADDQ ALVRAGFRAL LEVQDGIEVA GEAADGAEAH RLAAELAPDV ILMDIRMPGT
DGLEATRLIT ADEKLSGVRI LILTTFELDE YVFEAIRAGA SGFLLKDTEP ADLLRGLRAV
AAGEALLAPS VTRRLIAEFA VRSKRTGPNP AAEQIKALTE REREVLALVA AGLSNEEIAD
RLVLSPLTAK THVSRSMVKL GARDRAQLVV LAYESGLARP GWLD
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