Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5944 |
Symbol | |
ID | 8337306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6861628 |
End bp | 6863226 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644959048 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003116643 |
Protein GI | 256395079 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.420174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.713256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCC AGAATGCGTG GCACCCGAGC GGTGACCAGT CCATTGCCCG GCGCGGTACG CTTGCCGACT TGTTGCGTCG TAGTGCTGCG CGGGAGCCTG GCAAGCTGGC GCTCGTCTTC GGTGGGGTGC GGCAGACTTT TGCCGAGCTT GATGTGACCG TCAGTCGGGC CGCGAATGCC CTTGCTGAGC GGGGTGTGCG GTACGGGGAT CGGGTCCTGT TGCTCGCGCA CAATTCGCAC GGCTTCGTCG TCGCCTACTT CGCGCTCGCG CGGCTCGGTG CGGTCTCCGT GCCGGTGAAT TTCATGCTGG GTCCCGATGA GATCGCCTAC GTTCTCACGC ATTCCGGCGC CGTCGCGGTC ATCGCTGAGG ACGCGCTGGC CGACACCGCT GACCGCGCGT GCCAGGTCGC CGGCATCGTG CCTGTCGTCA GGGCCGCGAT CAGTAGCGGC GCCACCGAGA CCCCGGAAGG CTGGCTCGAC TTCGAGACCG CCTACCGAAA CGCCTCCGCC GACGAGCCCG ACGCCCCCGT CACCGACGAC GACCCCGTCC AGATCATGTA CACCTCCGGC ACGGAGTCAC GTCCCAAGGG CGCCGTCATG TCCACCCGGA ACCTGATCGC GCAGTACACC AGTGCCATCG TCACCGGCGC CATGTCCGCC GACGACATCG AGGTCCACGC CCTCCCGCTC TACCACTGCG CGCAGCTTCA CTGCTTCCTC ACCCCCGACA TCCAGCTCGG CGCCACCAGC ATCGTGCTCC CCGGCGCCGA TCCCGCGACG ATCCTGCGCA CCGTCGAGCT GGAGCACGTC ACCAAGCTCT TCTGCCCGCC GACGGTCTGG ATCGCCCTGC TGCGCCATCC CGATTTCGAC GCCCGCGATC TCAGTACCCT GCGCAAGGGC TACTACGGTG CCGCCGCGAT GCCGGTCGAG GTCCTGGCCG AACTGCGCCG CCGGCTTCCC GAGCTGCGGC TGTACAACTT CTACGGCCAG ACCGAGATGT CCCCGGTCGC CACCGTGCTC GGTCCGGAGG ACCAGGAACG CAAGCCCGGC TCGGCCGGCC GTGCCGCGCT CAACGTCGAG ACCCGCGTGG TCGACGACGC CGGGAACGAG GTCCCGCGCG GCGAGGTCGG CGAGATCGTG CACCGCGGCC CGCACACGAT GCTCGGCTAC TGGAACGACC CCGAGCGCAC CGCCGAGGCC TTCCGCGGCG GCTGGTTCCA CAGCGGCGAC CTCGGCGTCA TGGACGAGGA GGGCTACCTC GCCGTCGTGG ACCGGAAGAA GGACATGATC AAGACCGGCG GGGAGAACGT CGCGAGCCGC GAGGTCGAGG AGACCGTCTA CCAGCACCCG GCGGTCGCCG AGGTGGCGGT GTTCGGCGTG CCGGATCCGT ACTGGATCGA GATGGTCTGC GCGGCGGTGG TGGTCAAGCC GGGGGAGCGG CTGGAGCCGG AGGAGGTCGT CGAGTTCTGC CGGGCGCGGC TGGCGGGGTT CAAGACGCCC AAGAAGGTGG TCATCGTCCC CGCGCTCCCG AAGAACCCCT CCGGCAAGGT CCTCAAGCGC GAACTGCGCG AGATCCACGC TGCCTCTGAC AGCGCATGA
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Protein sequence | MTAQNAWHPS GDQSIARRGT LADLLRRSAA REPGKLALVF GGVRQTFAEL DVTVSRAANA LAERGVRYGD RVLLLAHNSH GFVVAYFALA RLGAVSVPVN FMLGPDEIAY VLTHSGAVAV IAEDALADTA DRACQVAGIV PVVRAAISSG ATETPEGWLD FETAYRNASA DEPDAPVTDD DPVQIMYTSG TESRPKGAVM STRNLIAQYT SAIVTGAMSA DDIEVHALPL YHCAQLHCFL TPDIQLGATS IVLPGADPAT ILRTVELEHV TKLFCPPTVW IALLRHPDFD ARDLSTLRKG YYGAAAMPVE VLAELRRRLP ELRLYNFYGQ TEMSPVATVL GPEDQERKPG SAGRAALNVE TRVVDDAGNE VPRGEVGEIV HRGPHTMLGY WNDPERTAEA FRGGWFHSGD LGVMDEEGYL AVVDRKKDMI KTGGENVASR EVEETVYQHP AVAEVAVFGV PDPYWIEMVC AAVVVKPGER LEPEEVVEFC RARLAGFKTP KKVVIVPALP KNPSGKVLKR ELREIHAASD SA
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