Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5914 |
Symbol | |
ID | 8337276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6824664 |
End bp | 6825395 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644959018 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003116613 |
Protein GI | 256395049 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.961809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.157742 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGACA GGACTACCAG CGGCGCCGCC GTCTTCGCGG GCACGGCTCC GGGGCCCGAC CCGGAGCGCG GCCCGGCGCT GAACCTGCCC CGCGTGCTCG GCCACCACTC GCTGCGCGAG CAGGTCTCGC ACGCGCTGCG CGCGGCCCTG ATCGCCGGCG AGCTGCGGCC CGGGGTGGTG TACTCCGCGC CGGTCCTGGC CGCCGGCTTC GGGGTGTCGG CGACGCCGGT ACGCGAGGCG ATGCTCGACC TGGCGAAGGA AGGGCTGGTC GAGGTCGTGC GGAACAAGGG GTTCCGGGTG ACCGAGCTGT CCGAGGCGGA CCTGGACCAG TTCACCGAGA TCAGGGCCCT GATCGAGGTG CCGGTGGTGA CCGGCCTGGC CCGCGGCGCC GCCCTGGGCG ACCTGCAGGC GCTGCGTCCG GCCGCGGAGG CCATCGTCAC CGCCGCCAAG GCGCGCGACC TGATCGGCTA TGTCGAGGCC GACCAAGCCT TCCACCTGGC GCTGCTCGGC CTGTCGGGCA ACCCGCACCT GGTGGAGGTG GTCAGCGACC TGCGCAACCG CTCGCGGCTG TACGGCCTGC CCTCGCTCGC CGACGCCGGA GCGCTCGCCA GCTCCGCCGA GGAGCATGTG CAGCTCGTGG ACGCGCTGGT CGCCCGCGAT GCCGACAGGG TCGAGGCGCT GATGAAGACG CACCTGACGC ATGTGCGGTC GATCTGGGCG GGGCGCGAGT AG
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Protein sequence | MPDRTTSGAA VFAGTAPGPD PERGPALNLP RVLGHHSLRE QVSHALRAAL IAGELRPGVV YSAPVLAAGF GVSATPVREA MLDLAKEGLV EVVRNKGFRV TELSEADLDQ FTEIRALIEV PVVTGLARGA ALGDLQALRP AAEAIVTAAK ARDLIGYVEA DQAFHLALLG LSGNPHLVEV VSDLRNRSRL YGLPSLADAG ALASSAEEHV QLVDALVARD ADRVEALMKT HLTHVRSIWA GRE
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