Gene Caci_5914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5914 
Symbol 
ID8337276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6824664 
End bp6825395 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content74% 
IMG OID644959018 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003116613 
Protein GI256395049 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.961809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.157742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACA GGACTACCAG CGGCGCCGCC GTCTTCGCGG GCACGGCTCC GGGGCCCGAC 
CCGGAGCGCG GCCCGGCGCT GAACCTGCCC CGCGTGCTCG GCCACCACTC GCTGCGCGAG
CAGGTCTCGC ACGCGCTGCG CGCGGCCCTG ATCGCCGGCG AGCTGCGGCC CGGGGTGGTG
TACTCCGCGC CGGTCCTGGC CGCCGGCTTC GGGGTGTCGG CGACGCCGGT ACGCGAGGCG
ATGCTCGACC TGGCGAAGGA AGGGCTGGTC GAGGTCGTGC GGAACAAGGG GTTCCGGGTG
ACCGAGCTGT CCGAGGCGGA CCTGGACCAG TTCACCGAGA TCAGGGCCCT GATCGAGGTG
CCGGTGGTGA CCGGCCTGGC CCGCGGCGCC GCCCTGGGCG ACCTGCAGGC GCTGCGTCCG
GCCGCGGAGG CCATCGTCAC CGCCGCCAAG GCGCGCGACC TGATCGGCTA TGTCGAGGCC
GACCAAGCCT TCCACCTGGC GCTGCTCGGC CTGTCGGGCA ACCCGCACCT GGTGGAGGTG
GTCAGCGACC TGCGCAACCG CTCGCGGCTG TACGGCCTGC CCTCGCTCGC CGACGCCGGA
GCGCTCGCCA GCTCCGCCGA GGAGCATGTG CAGCTCGTGG ACGCGCTGGT CGCCCGCGAT
GCCGACAGGG TCGAGGCGCT GATGAAGACG CACCTGACGC ATGTGCGGTC GATCTGGGCG
GGGCGCGAGT AG
 
Protein sequence
MPDRTTSGAA VFAGTAPGPD PERGPALNLP RVLGHHSLRE QVSHALRAAL IAGELRPGVV 
YSAPVLAAGF GVSATPVREA MLDLAKEGLV EVVRNKGFRV TELSEADLDQ FTEIRALIEV
PVVTGLARGA ALGDLQALRP AAEAIVTAAK ARDLIGYVEA DQAFHLALLG LSGNPHLVEV
VSDLRNRSRL YGLPSLADAG ALASSAEEHV QLVDALVARD ADRVEALMKT HLTHVRSIWA
GRE