Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5889 |
Symbol | |
ID | 8337251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6796405 |
End bp | 6797688 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644958993 |
Product | bifunctional RNase H/acid phosphatase |
Protein accession | YP_003116588 |
Protein GI | 256395024 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.733472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCGCA CGTTCATCGT CGAGGCCGAC GGAGCCTCCC GCGGCAACCC GGGCCCGGCG TCCTACGGCG CCCTGGTCGC CGACGCCGCC ACCGGCGAGG TCCTGGCCGA ACTCGCCGAG GGCCTGGGCG TGGTGACCAA CAACGTCGCG GAGTACCGCG GCCTGATCGC CGGCCTGCGC GCCGCCTACG CCCTCGACCC CCACGCCGAG GTCGAGGTCC GCATGGACTC CAAGCTGGCG GTCCAGCAGA TGAGCGGGGT GTGGCAGGTC AAGCACCCCG ACATCAAGCA GCTCGCCGTC CAGGCGCGCA CGGCGTTCCC GCAAGCGGGC GCGGTGCGCT ACACCTGGGT GCCGCGCGCG GAGAACAAGA GGGCTGACGC GCTGGCGAAC CTGGCGCTGG ACGACCCGGC GGCGGCCGCG GCGAAGATGG CCGAGGCCGA GGTGATGACG GCGGCTTTCC GGGCGGCTCG TGCGGCTCGG GAGGCTGGAG GCGGCGACGG TTCGGGTGGC GAGGGCGGCG CTGCGGCGGC AGCTGCCTCG CAGCAGGAGG CGCTGCCCGG CATCAGCGAG AACACCGCTG CCGAGGCGGC GGTCACCACC TCAAGCTCAA GCAACCCAGC ACCATCCTCA TACCAGCAAC CGAGCTGGTC CCCGGCACCC GACATGGGCC CGCCGACCAC GCTCCTCCTC CTGCGCCACG GCGCGACCGC GCTCACCGCC GAGAAGCGCT TCTCCGGCGC CGGCGACCCC GAACTCTCCG CCGTCGGCCT CCAGCAGGTC GATGCCGTCG CCCGCCGGTT GGCCGCGCGT GGCGGCGTCG ACGCGATCGT CGCCTCGCCG CTGGGACGCA CCGTGCAGAC CGCGCAGGCC GCCGCCGACG CGCTCGGGCT GCCGGTCGAG ATCGACCCCG GCTTCCGGGA GACCGACTTC GGGCTCTGGG ACGGTTACAG CTTCGCCGAG GTCCGCGAGC GCTGGCCCGC CGAGCACCGC GCCTGGCTGG CCTCGACCGC CGTCGCGCCG CCGCAGGGGG AGTCCTTCGA CGCGGTCGCC GACCGCGTGC TGGCCGCGCG CGATGATCTG ATCGCCCGGT ACGCGCGCCG GACCGTCCTG GTCGTCTCGC ATGTGACGCC TATCAAAACC CTGATCCGCG ACGCGCTCGG CGCCCCGCCG GAATCCCTGT ACGCCATGGA GCTCTCGGCC GCCTCGCTGT CGGTCCTCAC GTGCTATTCC GACGGCCGCG CCTCGATGCG CCTGTTCAAC GACACCGCGC ATCTGACCGG TTGA
|
Protein sequence | MARTFIVEAD GASRGNPGPA SYGALVADAA TGEVLAELAE GLGVVTNNVA EYRGLIAGLR AAYALDPHAE VEVRMDSKLA VQQMSGVWQV KHPDIKQLAV QARTAFPQAG AVRYTWVPRA ENKRADALAN LALDDPAAAA AKMAEAEVMT AAFRAARAAR EAGGGDGSGG EGGAAAAAAS QQEALPGISE NTAAEAAVTT SSSSNPAPSS YQQPSWSPAP DMGPPTTLLL LRHGATALTA EKRFSGAGDP ELSAVGLQQV DAVARRLAAR GGVDAIVASP LGRTVQTAQA AADALGLPVE IDPGFRETDF GLWDGYSFAE VRERWPAEHR AWLASTAVAP PQGESFDAVA DRVLAARDDL IARYARRTVL VVSHVTPIKT LIRDALGAPP ESLYAMELSA ASLSVLTCYS DGRASMRLFN DTAHLTG
|
| |