Gene Caci_5818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5818 
Symbol 
ID8337179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6722666 
End bp6723283 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content72% 
IMG OID644958922 
ProductDimethylmenaquinone methyltransferase 
Protein accessionYP_003116517 
Protein GI256394953 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.95078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCT TTGCCGACGT ACCCACCACC GCCCTGGCCG ACGTGCTCAC CCGCGAGAAC 
GTCATGGACA CCGATATCCG GCCGCTGACC GGGGCGCCGG GGCGCCTGGC CGGCCCGGCG
TTCACCGTGC GCTGCCCGCC CGGGGACAAC CTCATGGTCC ACGCCGCGAT CTACCGCGCC
GAGCCCGGTT CGGTCATCGT CGTGGACACC GGCGGCGACG TGGACTACGC GGTGGCCGGC
GGGAACGTGA TGGCGGTCGC GCAGCGCCGG GGCATCGCCG GATTCGTCGT GGACGGCGTG
ATCCGCGACC TGGCCGAGGC GCGGGAAGCC GGCTTCCCGG TGTTCGCCCG CGGCGTCATC
CCGATCCCCG GCGCCAAGGC GGTCGTCAAG CGGCACAACA TCACGGTGCG GTGCGGAGGC
GTGATGGTGC ACCCCGGCGA CATCGTGGTC GCCGACGAGG AGGGCATCGT CGTCGTTCCC
GTGGCTCGCA AAGAAGAGGT GTTCGCGGCG GCGCGCGCCA AGCTGGCCAA GGACGAGGCC
GAGAGCCTGG AGGACTGGGA GCGCGCGCAC CGGGTGCGGA TCGACAAGCT GCTCGCCGAG
GGTGGGTTCG AGGGCTGA
 
Protein sequence
MDTFADVPTT ALADVLTREN VMDTDIRPLT GAPGRLAGPA FTVRCPPGDN LMVHAAIYRA 
EPGSVIVVDT GGDVDYAVAG GNVMAVAQRR GIAGFVVDGV IRDLAEAREA GFPVFARGVI
PIPGAKAVVK RHNITVRCGG VMVHPGDIVV ADEEGIVVVP VARKEEVFAA ARAKLAKDEA
ESLEDWERAH RVRIDKLLAE GGFEG