Gene Caci_5814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5814 
Symbol 
ID8337175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6720195 
End bp6720776 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content72% 
IMG OID644958918 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003116513 
Protein GI256394949 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAG AACCGGACAT GGACGCCCTG GTCCGCCGCC GCATCCGCAC CCTGCGCCTG 
GCCCGCGGCT GGACCCTGGA CTCCCTGGCG TCGCGCTGCG ACCTGAGCCC GTCCAACCTC
AGCCGCATCG AGACCGGCCA GCGCCGCATC GCCCTGGACC AGCTGGTCCC GATCGCGCGC
GCCCTGGGCA CCACGCTCGA CCAGCTGGTC GAGCCCGGCG ACGACACCGG CGTGGTGATC
CGCCCCGAGC CGGTCCAGAC CCCGGGCATG ACCACCTGGC TGCTGTCGAA TGAGCGCTCC
CCGAACGGCG CCACGGTCGC CAAAATGCGC ATCACCGCCG AGCGCCCCGC GGGCCCGGAG
CACCTGCGCG TCCACCCCGG CCGCGACTGG TTCACGGTCC TGTCCGGTAC CGCCGAACTC
CACCTCGGCG ATCGCGTCAT CCTGGTTCAG GCCGGCAACG CCGCGGAGTT CACCACCATG
ACGCCGCACC TGATCGCCGC GCACGGCTCC GCCGTGGAGA TCCTGACGAT CCTCGACCAC
GACGGCGAGC GTGCACACCG GCACGATTGC GAGGCGCCGT AA
 
Protein sequence
MTQEPDMDAL VRRRIRTLRL ARGWTLDSLA SRCDLSPSNL SRIETGQRRI ALDQLVPIAR 
ALGTTLDQLV EPGDDTGVVI RPEPVQTPGM TTWLLSNERS PNGATVAKMR ITAERPAGPE
HLRVHPGRDW FTVLSGTAEL HLGDRVILVQ AGNAAEFTTM TPHLIAAHGS AVEILTILDH
DGERAHRHDC EAP