Gene Caci_5789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5789 
Symbol 
ID8337150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6689892 
End bp6691109 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content70% 
IMG OID644958893 
Producthistidine kinase 
Protein accessionYP_003116488 
Protein GI256394924 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0689027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC GGCTCAAGCT CACCTTCAGC TACGCCGGCC TGGTCATGCT CGCCGGCTCC 
CTACTGATCG GCGTCGCCTG GATCTTCGCG CTGCGCTGGC TGCCGGACAA CGCCGCCGTC
ATCAAAAACG CGCAGCAGTA CGCCCCGAAA GGCATGGGCA ACAGTCCCGT GGTCATCACC
GGTCCGAGCC AATCGGACCT GATGCACGGC TTCATCCCCG CCGCGGCCGT GGCGGTAGCC
TTCCTGCTAC TGCTGGGGCT GGTCGGAGGC TGGTTCCTGG CCGGCCGCAT GCTCGCCCCG
CTGACCCGCA TCGCCGACGC CACCCGCCTG GCCGCGACCG GCTCGCTGTC CCACCGGATC
GAGCTGGAGG GCACCAACGA CGAGTTCCGC GAACTCGCTG ACGCCTTCGA CACCATGCTC
GCGCAGCTCG AGGCGCACGT CGCCGAACAA CGGCGTTTCG CCGCCAACGC CTCCCACGAA
CTGCGCACCC CGCTGGCGAT CACCCAGTCC CTCCTGGACG CCGCCCGCAA CGACCCCGAC
CGCGACACCG GCCAGCTCAT CGACCGGCTG CACGTCGTCA ACACCCGCGC GATCGACCTC
ACCGAGGCGC TCCTGCTACT CAGCCGCGCG AACCAGCGGT CCTTCGCCCG CGAGGAAGTC
GACCTCTCAC TGGTCGCCGA GGAAGCCGCC GAAACGCTCT TCCCCATGGC AGAGAGGCGC
GGCCTGACCA TAGAGACGAT CGACACCTCC GGCGGCGCGG CGCCCCCCGC CATCGGCTCA
CCGGCGCTGC TCCTGCAACT GGCGACGAAC CTGGTCCACA ACGCGATCGT GCACAACCTG
CCCGGCCAAG GCACCATCTG GGTCATCACC AGCGCTCACG CCGACTACGC GGAACTCACC
GTGGAGAACA CCGGCGAGCA GCTGACCCCG GAGCTGGTGG CCACCCTCGC CGAGCCCTTC
CAGCGCGGCA GCGAACGCAT CCGCACCGAC CACGCGGGCG TCGGCCTCGG ACTGGCGATC
GTCAAGAGCA TCACCTACGC CCATGACGGG ACCCTCACCC TCACTCCCCG CCCCACCGGA
GGTCTCCGCG TCACGGTACG GCTTCCCGTC CGCCGAGCCC TGACGGCCGA GGCACCCGAG
GCGCGATACA TACCGACCGC GCTACGACTG GCACGTATCG GGCCGGCGCC GGCCCATCAG
CCTGGCTCTC CTACCTAG
 
Protein sequence
MSARLKLTFS YAGLVMLAGS LLIGVAWIFA LRWLPDNAAV IKNAQQYAPK GMGNSPVVIT 
GPSQSDLMHG FIPAAAVAVA FLLLLGLVGG WFLAGRMLAP LTRIADATRL AATGSLSHRI
ELEGTNDEFR ELADAFDTML AQLEAHVAEQ RRFAANASHE LRTPLAITQS LLDAARNDPD
RDTGQLIDRL HVVNTRAIDL TEALLLLSRA NQRSFAREEV DLSLVAEEAA ETLFPMAERR
GLTIETIDTS GGAAPPAIGS PALLLQLATN LVHNAIVHNL PGQGTIWVIT SAHADYAELT
VENTGEQLTP ELVATLAEPF QRGSERIRTD HAGVGLGLAI VKSITYAHDG TLTLTPRPTG
GLRVTVRLPV RRALTAEAPE ARYIPTALRL ARIGPAPAHQ PGSPT