Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5789 |
Symbol | |
ID | 8337150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6689892 |
End bp | 6691109 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958893 |
Product | histidine kinase |
Protein accession | YP_003116488 |
Protein GI | 256394924 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0689027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCC GGCTCAAGCT CACCTTCAGC TACGCCGGCC TGGTCATGCT CGCCGGCTCC CTACTGATCG GCGTCGCCTG GATCTTCGCG CTGCGCTGGC TGCCGGACAA CGCCGCCGTC ATCAAAAACG CGCAGCAGTA CGCCCCGAAA GGCATGGGCA ACAGTCCCGT GGTCATCACC GGTCCGAGCC AATCGGACCT GATGCACGGC TTCATCCCCG CCGCGGCCGT GGCGGTAGCC TTCCTGCTAC TGCTGGGGCT GGTCGGAGGC TGGTTCCTGG CCGGCCGCAT GCTCGCCCCG CTGACCCGCA TCGCCGACGC CACCCGCCTG GCCGCGACCG GCTCGCTGTC CCACCGGATC GAGCTGGAGG GCACCAACGA CGAGTTCCGC GAACTCGCTG ACGCCTTCGA CACCATGCTC GCGCAGCTCG AGGCGCACGT CGCCGAACAA CGGCGTTTCG CCGCCAACGC CTCCCACGAA CTGCGCACCC CGCTGGCGAT CACCCAGTCC CTCCTGGACG CCGCCCGCAA CGACCCCGAC CGCGACACCG GCCAGCTCAT CGACCGGCTG CACGTCGTCA ACACCCGCGC GATCGACCTC ACCGAGGCGC TCCTGCTACT CAGCCGCGCG AACCAGCGGT CCTTCGCCCG CGAGGAAGTC GACCTCTCAC TGGTCGCCGA GGAAGCCGCC GAAACGCTCT TCCCCATGGC AGAGAGGCGC GGCCTGACCA TAGAGACGAT CGACACCTCC GGCGGCGCGG CGCCCCCCGC CATCGGCTCA CCGGCGCTGC TCCTGCAACT GGCGACGAAC CTGGTCCACA ACGCGATCGT GCACAACCTG CCCGGCCAAG GCACCATCTG GGTCATCACC AGCGCTCACG CCGACTACGC GGAACTCACC GTGGAGAACA CCGGCGAGCA GCTGACCCCG GAGCTGGTGG CCACCCTCGC CGAGCCCTTC CAGCGCGGCA GCGAACGCAT CCGCACCGAC CACGCGGGCG TCGGCCTCGG ACTGGCGATC GTCAAGAGCA TCACCTACGC CCATGACGGG ACCCTCACCC TCACTCCCCG CCCCACCGGA GGTCTCCGCG TCACGGTACG GCTTCCCGTC CGCCGAGCCC TGACGGCCGA GGCACCCGAG GCGCGATACA TACCGACCGC GCTACGACTG GCACGTATCG GGCCGGCGCC GGCCCATCAG CCTGGCTCTC CTACCTAG
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Protein sequence | MSARLKLTFS YAGLVMLAGS LLIGVAWIFA LRWLPDNAAV IKNAQQYAPK GMGNSPVVIT GPSQSDLMHG FIPAAAVAVA FLLLLGLVGG WFLAGRMLAP LTRIADATRL AATGSLSHRI ELEGTNDEFR ELADAFDTML AQLEAHVAEQ RRFAANASHE LRTPLAITQS LLDAARNDPD RDTGQLIDRL HVVNTRAIDL TEALLLLSRA NQRSFAREEV DLSLVAEEAA ETLFPMAERR GLTIETIDTS GGAAPPAIGS PALLLQLATN LVHNAIVHNL PGQGTIWVIT SAHADYAELT VENTGEQLTP ELVATLAEPF QRGSERIRTD HAGVGLGLAI VKSITYAHDG TLTLTPRPTG GLRVTVRLPV RRALTAEAPE ARYIPTALRL ARIGPAPAHQ PGSPT
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