| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5774 |
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| Symbol | |
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| ID | 8337135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6673328 |
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| End bp | 6674128 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958878 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003116473 |
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| Protein GI | 256394909 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.798057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTC ACCTGCAGGG AAAGCGCGCA CTGATCACCG GCTCGAGCTC TGGGCTCGGG
GAGGCCACGG CCAGGATGTT GGCGGCTGAG GGGGCGGCCG TCGTCATCCA TGGGCGGAAC
GGGGGGCGCG CGGAGGCGGT CGCGGCTGCC ATCCGCGAGG GCGGCGGGGT GGCGACCGTC
GCGCTCGGCG ACCTGGCCAC CGACGAGGGA GCTGCCGAGG TCGCTCGGCA GGCGAGTGCC
GACGGGCCTG TCGACATCCT GGTGAACAAC GCCGGGTTCT ATCGGCATCT GTCGTGGGCC
GAGGCGTCGC CGGCCGAGTG GAGCGAGACG TACAACGTCA ACGTCGTCTC GGGGGTGCGG
ATGATTCAGC ACCTGGTTCC GGCGATGCGG GAGCGCGGGT GGGGGCGGGT CGTCACCATC
GGCGGCGGGC TGGCCTCCCA GCCGATGAAC ACCCACCCGC AGTACAACGC CACGCTCGCG
GCGCGCCACA ACCTCGCGGT GTCGCTGGCT CGCGAGCTCA AGGGCACCGG TGTGACCTCG
AACGTGGTCT CGCCCGGCGC CATCCTGGTC GAGGCGACCA AGGAGCTCGT GACGCAGATC
GGCCCGGCGC GCGGCTGGGG CGAGACGTGG GAGGAGATCC AGCCGAACGC GGTCCGGGCG
CTCATTCCGA ACGACCGGGA GCGGTTCGGC GAGCCGGACG AGATCGCGGC GGCGGTGGCG
TATCTGTGCG GCCCGCATGC CGCCTATGTC AGTGGCGCGA CGATCCGCGT CGACGGCGGG
CTGATCCGCT CGGCGTTCTG A
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| Protein sequence | MNLHLQGKRA LITGSSSGLG EATARMLAAE GAAVVIHGRN GGRAEAVAAA IREGGGVATV
ALGDLATDEG AAEVARQASA DGPVDILVNN AGFYRHLSWA EASPAEWSET YNVNVVSGVR
MIQHLVPAMR ERGWGRVVTI GGGLASQPMN THPQYNATLA ARHNLAVSLA RELKGTGVTS
NVVSPGAILV EATKELVTQI GPARGWGETW EEIQPNAVRA LIPNDRERFG EPDEIAAAVA
YLCGPHAAYV SGATIRVDGG LIRSAF
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