Gene Caci_5769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5769 
Symbol 
ID8337130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6668422 
End bp6669357 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID644958873 
Productputative oxidoreductase 
Protein accessionYP_003116468 
Protein GI256394904 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.675112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTGC GGGAAGCCAC CAGGCACCAG CCCTGGTACG ACACGAAAGG CACAGCCAGC 
ACCATGAGCA CGCTCCCCGC TTCGCTTCCC GGCGGCACCT GGACCCTGGG CGACATGACC
GTCACCCGCT TCGGCTTCGG CGCCATGCAG CTCGCCGGCC CGGGGGTCAT GGGCCCGCCC
GCCGACCACG ACGGCGCCCT GGCCGTCCTG CGCGAAGCCG TCGAACTCGG CATCACCCAC
ATCGACACCG CCGACGCCTA CGGCCCGCAC ACCACCAACC AGCTGATCCG CGAAGCCCTG
CACCCCTACC CCGACCCGCT GCACATCGTC ACCAAGGTCG GCGCCACCCG CGACGAGCAG
GGCGGCTGGC CGCCCGCCCG CCGACCCGAC CAGCTGCGCC GCGCCGTCCG GGAGAACCTG
GAGAACCTCG GCACCGACAC CCTCGACCTC GTCAACCTCC GGCTCGGCGA CGCCCAAGGC
CCGGTCCCCG GCTCGCTCGC CGAAGCGTTC GAGACCCTCC TGGAGCTCCA GCGGCAAGGC
GTGATCCGGC ACCTCGGGGT GAGCAACGCG ACCCCCGAGC AGGTCGCCGA GGCCCGGACG
CTCGCACCGA TCGTGTCCGT GCAGAACATG TACAACCTCG CCCACCGCCA CGACGACGAG
CTGATCGACG AGCTCGCCGA AGCGGGCATC GCCTACGTGC CCTTCTTCCC CCTCGGCGGC
TTCACCCCGC TTCAGTCCTC GGCGCTCACA GCCGTGGCCG CCCGGCTGGA GGCGACCCCG
ATGGCAGTCG CCCTGGCCTG GCTGCTGCGG CGCTCGCCGA ACATCCTGCT GATCCCCGGC
ACCTCCTCGG TCGCGCACCT GCGCCAGAAC ATCACCGGCG CCGCGCTCAC GCTCTCCGAC
GACGACCTCA CCGAGCTGGA CAAGATCGAC CGCTAG
 
Protein sequence
MMVREATRHQ PWYDTKGTAS TMSTLPASLP GGTWTLGDMT VTRFGFGAMQ LAGPGVMGPP 
ADHDGALAVL REAVELGITH IDTADAYGPH TTNQLIREAL HPYPDPLHIV TKVGATRDEQ
GGWPPARRPD QLRRAVRENL ENLGTDTLDL VNLRLGDAQG PVPGSLAEAF ETLLELQRQG
VIRHLGVSNA TPEQVAEART LAPIVSVQNM YNLAHRHDDE LIDELAEAGI AYVPFFPLGG
FTPLQSSALT AVAARLEATP MAVALAWLLR RSPNILLIPG TSSVAHLRQN ITGAALTLSD
DDLTELDKID R