| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5701 |
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| Symbol | gltD |
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| ID | 8337062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6576953 |
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| End bp | 6578413 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958805 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_003116400 |
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| Protein GI | 256394836 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGACC CCCGTGGTTT CCTGACCACC CCCCAGCAGC ACCCGGAGCG CCGCCCGGTC
GCCGAGCGCG TCCAGGACTG GAAAGAGGTC TACAAGCCCG GGGCGCTGCT GCCGATCATC
AACAAGCAGG CCGGCCGCTG CATGGACTGC GGGATCCCGT TCTGCCACAA CGGCTGCCCG
CTGGGCAACA TCATCCCGGA GTGGAACGAC CTGGTCTGGA AGGGCGACTG GGAGGGAGCC
TCCGACCGGC TGCACGCGAC CAACAACTTC CCGGAGTTCA CCGGGCGGCT GTGCCCGGCG
CCGTGCGAGA CCGCGTGCGT GCTGGGGATC AACCAGCCGG CGGTGACCAT CAAGAACGTC
GAGGTCTCCA TCATCGACCG GGCGTGGGAG GACGGGACCG TCAGGCCTCT GCCGCCCGAG
CGCCTGTCCG GCCGCACGGT CGCGGTGATC GGCTCCGGTC CCGCCGGGCT GGCCGCCGCG
CAGCAGCTCA CGCGCGCCGG GCACACCGTC GCGGTCTACG AGCGCGCCGA CCGGATCGGC
GGGCTGCTGC GCTACGGCAT CCCCGAGTTC AAGATGGAGA AGCGCCACCT GAACCGGCGG
ATCGAGCAGA TGCGCGCCGA GGGCACCAAG TTCCGTCCCG GCATGCACAT CGGAGTGGAC
CTCACCGGAG ACGCGCTCCT GGCGCGCTAC GACGCCATCG TGCTCGCGGT CGGCTCGACC
AAGGCCCGGG AGCTGGACGT GCCCGGCCGC GACCTGGCCG GCGTGCACCA GGCGATGGAC
TACCTGCCGT ACGCGAACAA GACCTGCGAG GGCGACTACC TGACCGCGCC GATCGACGCG
TTCGGCAAGC ACGTCGTGGT CATCGGCGGC GGCGACACCG GGGCGGACTG CCTGGGCACC
GCCACGCGTC AGGGTGCTGA GTCGGTCACC CAGCTGGAGA TCATGCCCCA GCCGACCGGC
GACCGCCCGG CGAACCAGCC GTGGCCGACC TACCCGATGA TCTTCCGCGT CTCCTCGGCG
CACGAGGAGA ACGGCGACCG CGTCTACGCG GTGTCCACCA CCGAGTTCGT GGGCGACGAC
AACGGCCGGG TCAAGGCCCT GCGCCTGGTC GAGGTCCGGT TCGAGGGCGG GCGCCCGGTC
CCGGTGGCCG GCACCGAGCG GGAGATCCCG GCCGACCTGG TGCTGCTGGC GATGGGCTTC
GTCGGCCCGG AGCGCGGCAA CGGCCTGATC GACCAGCTGG GCCTGGCCCT GGACGAGCGC
GGCAACATCG CGCGCGACGG GGAGTACGCC ACCAACGTGC CGGGCGTGTT CGTGGCCGGC
GACGCCGGGC GCGGACAGTC GCTGATCGTC TGGGCGATCG CCGAGGGCCG CTCGGCGGCC
AGCTCGGTGG ACGCCTACCT GGCCGGCTCG ACCACGCTGC CCAAGCCGAT CCCGCCGACG
GCGCGGCCGG TGACGGTGTG A
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| Protein sequence | MADPRGFLTT PQQHPERRPV AERVQDWKEV YKPGALLPII NKQAGRCMDC GIPFCHNGCP
LGNIIPEWND LVWKGDWEGA SDRLHATNNF PEFTGRLCPA PCETACVLGI NQPAVTIKNV
EVSIIDRAWE DGTVRPLPPE RLSGRTVAVI GSGPAGLAAA QQLTRAGHTV AVYERADRIG
GLLRYGIPEF KMEKRHLNRR IEQMRAEGTK FRPGMHIGVD LTGDALLARY DAIVLAVGST
KARELDVPGR DLAGVHQAMD YLPYANKTCE GDYLTAPIDA FGKHVVVIGG GDTGADCLGT
ATRQGAESVT QLEIMPQPTG DRPANQPWPT YPMIFRVSSA HEENGDRVYA VSTTEFVGDD
NGRVKALRLV EVRFEGGRPV PVAGTEREIP ADLVLLAMGF VGPERGNGLI DQLGLALDER
GNIARDGEYA TNVPGVFVAG DAGRGQSLIV WAIAEGRSAA SSVDAYLAGS TTLPKPIPPT
ARPVTV
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