Gene Caci_5649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5649 
Symbol 
ID8337009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6509974 
End bp6511005 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID644958753 
ProductLuciferase-like monooxygenase 
Protein accessionYP_003116349 
Protein GI256394785 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03559] probable F420-dependent oxidoreductase, Rv3520c family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.442981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGG ACCTCAAGCT CGGCCTCCAA CTCGGCTACT GGGCCTCCAA GCCGCCCGAG 
TATGACTGGG TCGGCCTGGC GCGGTACGCC GAGGACCTCG GCTTCGACTC GGTGTGGACC
GCCGAGTCCT GGGGCTCGGA CGTGTTCACG CCGCTGGCGT ACCTGGCCGT CTCGACCAGC
CGCATCCGCC TGGGCACCGG CATCGCGCAG ATGGCGGCGC GCACGCCCAC CGCCACCGCC
ATGAGCGCCA TCACGCTGGA CCACCTGTCC GGAGGCCGCG TGATCCTGGG GCTCGGGCTG
AGCGGACCGC AGGTGGTCGA GGGCTGGTAC GGCCGGCCGT ACCCGAAGCC GCTGGCCCGT
ACGCGCGAGT ACGTCGAGGT GATCCGCAAG GTGCTGCGCC GCGAGACGGT CACCAACGAC
GGCGAGTTCT ACCCGCTGCC GTATCAGGGC CCGGACTCCT CAGGCCTGGG CAAGCCGCTG
CGCACCAACC TGCGCCCCCT GCGCAAGGAC CTCCCGATCA TCCTCGGCGC CGAGGGCCCC
AAAAACGTCG CCCTGACCGC CGAAATCGCC GACGGCTGGC TCCCCCTCTA CTACGTCCCC
GAACGCCCCG AGGTCTACGC CGACCAGATC GCCGGCGCCA AAGACGGCTT CGAGATCACC
GCCATGGTCC ACCTGGCCTT CACCGGCGCC GCCCAAGACG ACATCGAACA AGCCCTCTGG
CCCATCAAGG GCGCCCTGGC CTTCTACGTC GGCGGCATGG GCGCCAAGGG CGCCAACTTC
CACAAGAACC TCATGGTCCG CATGGGCTAC GAAGCCGAAG CCGACCACAT CCAAGAACTC
TTCCTCGACG GCAAACGCGA CGAAGCCGTC ATGGCCGTCC CCACCGCCTT CGCCGACGAG
ATCTCCCTGG TAGGCCCACC CGAGCGCATC AAGGAGCGGC TGGTGGCCTG GCGCGAGTCC
CCGGTGACGA CCCTTCTGGT GACGGCTCGG GAGGAGGAGA CGCTGCGGGG GTTGGCGGAT
TTGGTGCTGT AG
 
Protein sequence
MTADLKLGLQ LGYWASKPPE YDWVGLARYA EDLGFDSVWT AESWGSDVFT PLAYLAVSTS 
RIRLGTGIAQ MAARTPTATA MSAITLDHLS GGRVILGLGL SGPQVVEGWY GRPYPKPLAR
TREYVEVIRK VLRRETVTND GEFYPLPYQG PDSSGLGKPL RTNLRPLRKD LPIILGAEGP
KNVALTAEIA DGWLPLYYVP ERPEVYADQI AGAKDGFEIT AMVHLAFTGA AQDDIEQALW
PIKGALAFYV GGMGAKGANF HKNLMVRMGY EAEADHIQEL FLDGKRDEAV MAVPTAFADE
ISLVGPPERI KERLVAWRES PVTTLLVTAR EEETLRGLAD LVL