| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5592 |
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| Symbol | |
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| ID | 8336952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6444655 |
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| End bp | 6446832 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958696 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003116292 |
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| Protein GI | 256394728 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
[TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.854543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.453092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG ACGCGGTGCT GGAGGTCACG GACCTGCGCG TGTCCTTCCC CGGCGAGAAG
GGGACGCGGC TGGAGGCCGT CAGAGGCCTG AGTTACCAGG TCCGGCGCGG CGAGACGCTG
GCGATCGTCG GCGAGTCGGG CTCGGGCAAG TCGGTGTCCT CGATGGCGGC GATCGGCCTG
CTGCCGACGA ACGCGAAAGT CACCGGCTCA GTGCGCTTCC GCGGCCGGGA GCTGCTGGGC
CTGAGCGACA AGGAGATGTC ACGCATCCGC GGCGCCGGCA TCTCGATGGT GTTCCAGGAC
CCGCTGTCCG CGCTGACCCC GGTGTACCGG GTCGGCGAGG CGATCGCGGC GGCGATCCGG
GTGCACCAGG AGGTGGCGTC GAGCATCGCG ACGCGGCGCG CGGTGGAGCT GCTGGAGCTG
GTCGGCATCC CGGATCCGGC GCGGCGCGCG CAGGCGTTCC CGCACGAGTT CTCCGGCGGC
ATGCGCCAGC GCGTGATGAT CGCGATGGCG ATCGCCAACG ACCCGGACGT GATCATCGCC
GACGAGCCGA CCACCGCCCT GGACGTGACG GTCCAGGCGC AGATCCTGGA GGTCCTGGCG
ACCGCGAAGG CGGCCACCGG CGCCGCGATC GTGCTGATCA CCCACGACCT CGGCGTGGTC
GCCGGCTTCG CCGACCGCGC CACGGTGATG TACGCGGGAC GCCCGGTGGA GACCGCGACC
GTCGAGGAGC TCTTCGCCGA GCCCCGGATG CCGTACACCG CCGGCCTGCT GGGCTCACTC
CCCCGCCTGG ACGCCGGCCG CGGCGCGCGG CTGCGCTCGA TCCCGGGCTC GCCGCCGTCG
CTGCTGGAGG TGGGGACGGG ATGCCCGTTC GCGCCGCGCT GCGAGTTCGT GCTGGAGGTG
TGCCGGACGA CGGAGCCGGA GCTGGTGGAG GTCGCGCGCG GGAGGGCTGC GGCATGTCAT
CGGAGCGGCG AAGGGCTGGA TCTGATGGCG ATCGGGGAAT CCGATGCGGT CGCAGCAGAT
CAGGACTCCG AACCCGCCGG TACTGAGTCA GAGCCCATAA AAGAGCTTGC AGCAACACCA
ACCGCAGATC CGGCCCGTAC CGAAGCCGCG CCGATCCCCG TCCTCACCGT CCGCGACCTC
ATCAAGCACC ACCCGCTGAC CAAGGGCGCT GTCATCCGCC GCCGCATCGG CACGGTCCGC
GCCGTCGACG GGGTCAGCCT CGACATCCCG GCGGGCAGCA CCCTGGCGCT GGTGGGCGAG
TCGGGTAGCG GCAAGACCAC CACCGTGATG GAGATCCTGC GGCTGCGCGC GCCGCAGGCC
GGGAGTATCA GCGTGCTGGG CCAGGACCTG GACGCGCTCA ATCGCGGCCG GAATGTGCGG
CGGCGGGCGA AGGAGGTGCG GGCCGGGATC GCCGCGGTGT TCCAGGATCC GTTGGCGTCG
TTGGATCCGC GGCTGCCGGT CGGCGATCTG CTGGCCGAGC CGTTGCGGAC GCACGGGCAC
GGCAAGCCCG GTGCGCGGGT GCGCGAGCTG CTGCAGATGG TCGGGCTGGA GCCGGCGCAC
GCGAACCGGT TCCCGCGTGA GTTCTCCGGC GGGCAGCGGC AGCGGGTGGC GATCGCCCGG
GCGCTGGCGT TGGAGCCGCG GCTGGTGGTG CTGGACGAGC CGGTGTCAGC CCTCGATGTC
TCCGTGCGTG CCGGGATTCT GAACCTGCTC GCCGATCTGC AGCGCGAGCT GGGACTGGCG
TATCTGTTCG TGTCGCACGA CCTGGCGGTG GTGCGGCACG TCGCGGACCG GGTCGCGGTG
CTGAACCTGG GGCGGGTCGT CGAGTACGGC GATGCCGACT CAGTGTTCGA AGATCCTCGG
CATCCCTATA CGCGCGCGCT GTTGTCGGCC GTGCCGGTGC CGGACCCGGT GGTGGAGCGG
CGGCGCGAGC GCATCGTGCT GCCGGGTGAT CCGCCGAGTC CGGTGGTGCT CGACGGCGAC
GCCGACGCGC TGCGCGGCTG CCGCTTCCGT GGCCGCTGTC CGCTCTACGC GGCGCTCGAA
TCGCCCGAGG CGCGCTCGCG CTGCGAGACC GAGGACTCGG CGCCGACGCC GGTCGACGGC
GACGCCGGAC GCACGGCCGC CTGCCATCAC CTGGGCGCCG AAGCGCCCGC CCTGATCCCG
CACGACACCG TGGCGTGA
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| Protein sequence | MSGDAVLEVT DLRVSFPGEK GTRLEAVRGL SYQVRRGETL AIVGESGSGK SVSSMAAIGL
LPTNAKVTGS VRFRGRELLG LSDKEMSRIR GAGISMVFQD PLSALTPVYR VGEAIAAAIR
VHQEVASSIA TRRAVELLEL VGIPDPARRA QAFPHEFSGG MRQRVMIAMA IANDPDVIIA
DEPTTALDVT VQAQILEVLA TAKAATGAAI VLITHDLGVV AGFADRATVM YAGRPVETAT
VEELFAEPRM PYTAGLLGSL PRLDAGRGAR LRSIPGSPPS LLEVGTGCPF APRCEFVLEV
CRTTEPELVE VARGRAAACH RSGEGLDLMA IGESDAVAAD QDSEPAGTES EPIKELAATP
TADPARTEAA PIPVLTVRDL IKHHPLTKGA VIRRRIGTVR AVDGVSLDIP AGSTLALVGE
SGSGKTTTVM EILRLRAPQA GSISVLGQDL DALNRGRNVR RRAKEVRAGI AAVFQDPLAS
LDPRLPVGDL LAEPLRTHGH GKPGARVREL LQMVGLEPAH ANRFPREFSG GQRQRVAIAR
ALALEPRLVV LDEPVSALDV SVRAGILNLL ADLQRELGLA YLFVSHDLAV VRHVADRVAV
LNLGRVVEYG DADSVFEDPR HPYTRALLSA VPVPDPVVER RRERIVLPGD PPSPVVLDGD
ADALRGCRFR GRCPLYAALE SPEARSRCET EDSAPTPVDG DAGRTAACHH LGAEAPALIP
HDTVA
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