| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5588 |
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| Symbol | |
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| ID | 8336948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6440589 |
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| End bp | 6441407 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958692 |
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| Product | Haloacid dehalogenase domain protein hydrolase type 3 |
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| Protein accession | YP_003116288 |
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| Protein GI | 256394724 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.16228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.729842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCAC CCCAAGTCAT CGCCACCGAT CTGGACCGTA CGCTGCTGCG CAGTGACGGG
ACCACGTCCG AGCGCACGCG CGCCGCCCTT GACCTGGCCA TGGAGCGCGG TGCGCAGGTG
ATAGCCGTGA CCGCGCGGCC GATCCGGTGG CTGGACCGGC TCAAGCCGTG CTTCGGGCGG
CTGCCGCACG TCATCGCCTC GAACGGCGCG GTCTGCTACG ACCTGGCCAC GGCGGTGGCC
TACGACGCGC GGCCGTTCGA TCCGGCGACG CTGCCCGCGC TGCTGGCCGA TCTGCGGGCC
GCGCTGCCGA CCGCGCGGAT CGCGCTGGAG GCGGCGCAGG GGATGGTGCG CGAGGCGGGG
TACGAGCTGT CGCTGTTCGA CCAGGACGAC GAGGACGCCG GGCGCCGCGT GGTGCCCTTC
GAGGATCTGG CCGCGGCGGT GGCGGACGGC GCGCTGCTGA AGATCCTGAT CACCGACCGG
GGGCGGAACA GCGCCGACAT GTTCGCCGAG GCGCTGCCCG CGGTGGGGAT GCTCGGCCAC
CTCACCTACT CCACCCCGCG CGGCGTGCTG GAGCTGGGAC CGCCCGGGGT CACCAAGGCC
ACGACGCTGG CTTCCTGGTG CGCGGCGCGC GGCATCGAGG CCGCGGACGT GGTCGCGTTC
GGGGACATGC CGAACGACAT CCCGATGCTC AGCTGGGCCG GGCGCTCGTG GGCGGTGGCG
AACGCGGTCG AGGAGGCCAA GGCGTCCGCG AAGGCGGTGA CGGCGACCAA CGACGAGGAC
GGAGTTGCTC AGGTCATCGA AGAGCTCTTC CATGGCTGA
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| Protein sequence | MNPPQVIATD LDRTLLRSDG TTSERTRAAL DLAMERGAQV IAVTARPIRW LDRLKPCFGR
LPHVIASNGA VCYDLATAVA YDARPFDPAT LPALLADLRA ALPTARIALE AAQGMVREAG
YELSLFDQDD EDAGRRVVPF EDLAAAVADG ALLKILITDR GRNSADMFAE ALPAVGMLGH
LTYSTPRGVL ELGPPGVTKA TTLASWCAAR GIEAADVVAF GDMPNDIPML SWAGRSWAVA
NAVEEAKASA KAVTATNDED GVAQVIEELF HG
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