Gene Caci_5542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5542 
Symbol 
ID8336902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6393501 
End bp6393959 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content69% 
IMG OID644958646 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003116242 
Protein GI256394678 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.774443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT CCTTGATCCT TCGCGACGCC ACCGCCGCCG ACCTGCCCGC GATCGTCGCC 
ATGCTCGCCG ACGACAAGCT CGGCTCCACA CGCGAGGACC CCGAGGACCT GACGCCCTAT
CTCGCGGCCT TCGCAGAGCT CGAAGCCGAC CCGAACCAGC GCCTGATCGT CGCCGAGCGC
GCCGGCGCCG CTGTCGGGAC GTTCCAGCTC ACCTTCATCC CCGGCGTGGC GCAGCGCGGT
CTGAAGCGCG CCATGATCGA GAGCGTGCGC GTCGTCACCA GCGAGCGCGG CAGCGGGCTC
GGCACGCAGA TGATGCGCTG GGCGATCGAT GAGGCGCGGC AAGCCGGCTG CGGACAGGTG
CAGCTGACGT CGAACGCGGC GCGTGCCGAT GCGCACCGGT TCTACGAGCG GCTGGGATTC
GTGCCCTCAC ATGTGGGGTT CAAGCTGAAG TTGGCGTAA
 
Protein sequence
MSESLILRDA TAADLPAIVA MLADDKLGST REDPEDLTPY LAAFAELEAD PNQRLIVAER 
AGAAVGTFQL TFIPGVAQRG LKRAMIESVR VVTSERGSGL GTQMMRWAID EARQAGCGQV
QLTSNAARAD AHRFYERLGF VPSHVGFKLK LA