Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5487 |
Symbol | |
ID | 8336847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6326498 |
End bp | 6328513 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644958591 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_003116187 |
Protein GI | 256394623 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.153721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCGAG CCTCGGCCCT GGCGGTCGCC GCCTTGCTCC CGGTGCTGGT CGCGGCGCCG GCGGCGCGGG CCGACGAGGT GCGGTCGGCG CAGTGGCCGA TCACGTTCCT GAACCTGCCG CAGGCCTGGA AGACCACCAA GGGCGCCGGC GTCACGGTCG CGGTGCTCGA CACCGGCGTC GTGGGCTCGC GCGCGGACCT GACCGGGCAG GTCACGACCG GTCCGGACCT GGTCGGCGGG AGTGGGAAGC CGGGGGATCC GGACTGGGGC GTGCACGGGA CCGGGATGGC TTCGGTGATC GCCGGGCACG GGCACGGTCC CGGCGGCAGC CAGGGCGTGA TGGGCGTCGC GCCGGCGGCG AAGATCCTGT CGGTGCGGGT GATCCGGGAC GACGAGAGCC CGGACACCGG GCTGCAGCAG GCCTCGCACA CCCCGATCTC GCAGGGCATC CGCTACGCCG TCGACCACGG CGCGCAGGTC ATAAGCATGT CCCTCGGCGG CACGGTGTCC GGCGCGGACA GCGACAGCAC GAACGAGGCC GACGCGGTGC GCTACGCCAT CGCGCACGGC GTGTCGGTGG TGGTGTCGGC GGGCAACTCC GGCGACAAGC CGTCGAAGGA CGTCACGGAG TACCCGGCCG GCGAGCGCGG GGTCATCGGC GTGGCGGCGG TGGACCAGAA CGGCAAGCGC GCCTTCTTCT CCTCGACCGG ATGGGACGTG GCGGTCGCCG CACCCGGCGT CGCCATTCCG ATGGCGCTGC CGGTCAACGA CCTGGCGGGG GACACCTACG CCGACTTCGG TCCCGAGATC GGCGACGACA TCCTGGTCGG CGCGGGGACG AGCCCGGCGT GCGCCTACGT CGCCGGGGTC GTGGCGCTGA TCCGCTCGGA GAATCCGGCG CTGAGCCCGG AGCAGGTGGC GCAGATCGTG AAGGACACCG CGTCGCACCG CCCGGCGCAG GGACGGAACG ACCAGCTCGG GAATGGGATC GTGGACCCGG TGGCGGCGCT GAAGGCGGCG GCGGGGGTGG CCGGGACGCC GCCCGCGCCG AAGGCGTCGC CGTATCAGGG GGCGAAGTAC TTCGGCTTCG GGCCGGAGGT GGTGGCCGAG CAGCGGATCG GCGGGCTGAA CGAGCGCCGG CGCGGGATGG TCGACGCCGC GGTGGCGGTG ACCGGGTCGC TGGTACTCGG CGGGTGGTTC GTGGCGCGGG GACGTCGGCG CGCGCGGGCC GCGGCGTTGC TGGCGCCGGT CGTGATACCG GTGCCCCTGC CGATGCCGAT CGGGTTCATG CCGCTCGGGC CGATGCCGAT CGGTCCGATG CCGGTGCCCG GGCCCATGCC GCCGGTGTCG GTGACGGTGC CGAATCCGTT TTTGGCCGGG GTCCCGGCCG AGATCCCGGC ACCCGTGCCC GAGCAGCCGC GCGTCTGGGC TCCCACTAAA GTCGAGCCCA TGACCGACTT CGCAGGACGC ACGCTGGCTC CCTCCGCCTT CACCAACGAC GACGGAGGCG CCGACCCTGC GCTGCTGGCC GTCCTGGAGG CGCACGGCCG GAGCGAAGCG GCGGTCGAGC ACGCGTACGG GTACCTGCTC AACGCGCGCG TCCTGGCGCC GATCGTCGCG GTGCTCGGCG AGGCCGAGGA AGTGACCGAC GACCAGGGCC GCACCCTGCG CCGCGACAAG AACAGCGACA TGGCGCTGGT GACGCTGGTC GCGCCGGACG GCACGCGCGC GCTGCCGGTG TTCACCTCGG TGCGCGCGCT CGTCGAGTGG AACCCGGAGG CGCGGCCGAT GCCGGTGGCG TTCCCGCGGG CCTGTGCGGC GGCGCTGGCC GAGGGGGCGG AGATCGTGTT GGTGGACCTG GCGCGGCCGT CGTTCCTGGA GGTCGAGCCG GCTGCCGTGC GCGCCTTCGC CGCGCTGCTG GAGAAGACCG AGGCCGAGGC GAGGACCGAG ACCGAGACCG AGACCGAGAC CGGCGACAAT GCCGGCGAGG CCGCCGACGA GGCGACCGCG AGCTGA
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Protein sequence | MRRASALAVA ALLPVLVAAP AARADEVRSA QWPITFLNLP QAWKTTKGAG VTVAVLDTGV VGSRADLTGQ VTTGPDLVGG SGKPGDPDWG VHGTGMASVI AGHGHGPGGS QGVMGVAPAA KILSVRVIRD DESPDTGLQQ ASHTPISQGI RYAVDHGAQV ISMSLGGTVS GADSDSTNEA DAVRYAIAHG VSVVVSAGNS GDKPSKDVTE YPAGERGVIG VAAVDQNGKR AFFSSTGWDV AVAAPGVAIP MALPVNDLAG DTYADFGPEI GDDILVGAGT SPACAYVAGV VALIRSENPA LSPEQVAQIV KDTASHRPAQ GRNDQLGNGI VDPVAALKAA AGVAGTPPAP KASPYQGAKY FGFGPEVVAE QRIGGLNERR RGMVDAAVAV TGSLVLGGWF VARGRRRARA AALLAPVVIP VPLPMPIGFM PLGPMPIGPM PVPGPMPPVS VTVPNPFLAG VPAEIPAPVP EQPRVWAPTK VEPMTDFAGR TLAPSAFTND DGGADPALLA VLEAHGRSEA AVEHAYGYLL NARVLAPIVA VLGEAEEVTD DQGRTLRRDK NSDMALVTLV APDGTRALPV FTSVRALVEW NPEARPMPVA FPRACAAALA EGAEIVLVDL ARPSFLEVEP AAVRAFAALL EKTEAEARTE TETETETGDN AGEAADEATA S
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