| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5455 |
|---|
| Symbol | |
|---|
| ID | 8336809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6285580 |
|---|
| End bp | 6286548 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644958553 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003116155 |
|---|
| Protein GI | 256394591 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.245866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.258375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAATC TCGGCTCCGA CGTCCACGAG ATCGACACGC TCATGTCCGG GCACACCGGC
ATCACCGCCG GCTACGCCAT CCTCGGCGAG CACCCGGCGC TGATCGAGAC CGGGACGGCG
AAGTCGGCGC CGGTGGTGCG CGACGCGCTG GCGGCGCTGG GGGTCGGGCC GGAGGATCTG
CGGACCATCG TGGTCACGCA CATCCACCTG GACCACGCCG GCGGCGTCGG GGACCTGGCG
GCGATGTTCC CGAACGCGGA GATCGTGGTG CACGCCTCGG GGGCGCGGCA CCTGGTGGAT
CCCACGCGGC TGATGTCCAG TGCGCGGCGG GTGTTCGGCT CGCTGATGGA CGACGTGTTC
GGGCCGCTGC TGCCCACCGA GGCGCGGCGG GTGCGCGCGG TGGAGGACGT CGGCTCCATC
GACCTCGGCG GCGGCCGGCG GCTGGAGACG CACCACACCC CCGGGCACGC GCGCCACCAC
GTCGGCCTGA TCGACAACGT CACCGGCGAC CTGTACGTCG GCGACGCCGC CGGCCTGTAC
ATCCCCTCCG ACGACCCCGA CCAGCCCGGC GACGTCCGCC CCGGCACCCC GCCGCCGGAC
TTCGACCTGC CGCTGGCGCT GAACTCGCTG GAGAAGTTCC GCACGCTGCG CCCGACCCGG
CTGCTGTTCA GCCACTACGG TCCGGTCCGC GACGTCACCG ACACCTTGGC GCGCGCCGAG
GAGGAGGTAC GGCTGTGGGT GGAGCTGGTG CGCGACGCGC GGACCAGCCG CCTGGACCTG
GACCACGCGA TCGAGATGGT GCGGGAGAAG ACCGCGGCGC GGTATCCGGT GGAGACCGCG
AATGAGGAGA CGCAGACGAA GTTCGAGGAG CTGTCGTCGT TCGCGTCGAA CATCGTCGGG
ATCAACATGT ATCTGAACAA GGCGGACGGG TGGGAGCACC CGATGGCCGA TGCTGCGAGC
GCGGGCTGA
|
|---|
| Protein sequence | MTNLGSDVHE IDTLMSGHTG ITAGYAILGE HPALIETGTA KSAPVVRDAL AALGVGPEDL
RTIVVTHIHL DHAGGVGDLA AMFPNAEIVV HASGARHLVD PTRLMSSARR VFGSLMDDVF
GPLLPTEARR VRAVEDVGSI DLGGGRRLET HHTPGHARHH VGLIDNVTGD LYVGDAAGLY
IPSDDPDQPG DVRPGTPPPD FDLPLALNSL EKFRTLRPTR LLFSHYGPVR DVTDTLARAE
EEVRLWVELV RDARTSRLDL DHAIEMVREK TAARYPVETA NEETQTKFEE LSSFASNIVG
INMYLNKADG WEHPMADAAS AG
|
|---|
| |