Gene Caci_5433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5433 
Symbol 
ID8336787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6259655 
End bp6260917 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content68% 
IMG OID644958531 
Producthypothetical protein 
Protein accessionYP_003116133 
Protein GI256394569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.393195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGA TGGCGGGCGA CGGTCCGTGG ATCCATCGTT TGACAAGGTC CTCCAAGAAG 
CCGTGGAGCC GCCGCCGCGC TGCCGCGTGG TGGACGGCGG CGGCCGTGCT GGTCTTCGGC
ATCGGGCTGA TAGCCGGCAA GGGCGGGAAC CCGCTGATAG ATCTGAAGGT CTATCGGGAC
GGCGGGATAT CGTTCATGAA GGATCTGCCG CTGTATACGA CGCGGTTTCC GCATCCGTTG
GACGGACCGG ACCTGCCGTT CACCTACCCG CCGTTCGCGG CCGTGCTGTT CAGCGTGCTG
GGTTTTGTCG GGTATCACCT GGCCGCGGTG CTCATGGTGC TGATCGGCTT CACGGCTCTG
ACCTGGACCA TCTATCTGGT GCTGCACAAC CGCGCCGGAG CCCGGTTCCT GCCCGAGCCG
ACGCCGCGGG TGCTGGTCAC CATCACCTTG CTCAGCCTGG TGATGGAGCC GATCAGCAGC
ACGTTCCTGC ACGGCCAGAT CAACCTGCTG CTGATGGGGC TGGTGGTCAC CGACGCCCTG
GGCCCGAAGA CCCGCATCCC GCGCGGCGCG CTGGCCGGCG TCGCCGCGGC GATCAAGCTG
ACCCCGGCGG TGTTCCTGCT CTACTTCGTC GCGCGCCGGC AGTGGAAGAG CGCCTCGAAC
ATGGTCGCCG CGTTCATCGG CGCGACCTCG CTGAGCATCA TCCTGGCGCC CCGGGACAGC
AAGGCGTACT GGACCGCCAC CGTCTTCGAT CCGACCCGCA TCGGCGACCT CGGATACGCC
GCCAACCAAT CGCTGCGCGG CGGACTGCAC CGGCTCGGCG GACTGCCGGG CCTGGCGATG
TCGGTGAAGA CCGAGGAGCG CCTGTGGTTC GCGCTCTCGA TGATCGTCAT AGCCCTGGCT
TACCACGGCG CGCGCCGGGC GATCCGGCGC GAGGACCCGG TGTGCGCCCT GGCCGTGGTC
GCCGCGTGCC AGCTGCTCAT CTCGCCGGTC TCCTGGTCGC ACCACTGGGT GTGGATCGCC
CCGATGCTGC TGCCCTTCGC GATCCAGATC GTCCGCGGCG GCGAGCGGCT GAAGATCGCC
GGGCTGGTCG TGCTCACCGC GGTGTTCCTC ATCGGCCCGC TACTGCTGTT CCCGGTCGAC
CACGGCTTGG AGATGCACTG GGGCTGGTGG GAGAACCTGA TCGGCGACGC CTATCTGATC
ATCACCCTGT CGTTCGTGGT CTGGGCCGCG TCGACCCGGC GGACACCGGC GCCGGTGCGT
TAG
 
Protein sequence
MAMMAGDGPW IHRLTRSSKK PWSRRRAAAW WTAAAVLVFG IGLIAGKGGN PLIDLKVYRD 
GGISFMKDLP LYTTRFPHPL DGPDLPFTYP PFAAVLFSVL GFVGYHLAAV LMVLIGFTAL
TWTIYLVLHN RAGARFLPEP TPRVLVTITL LSLVMEPISS TFLHGQINLL LMGLVVTDAL
GPKTRIPRGA LAGVAAAIKL TPAVFLLYFV ARRQWKSASN MVAAFIGATS LSIILAPRDS
KAYWTATVFD PTRIGDLGYA ANQSLRGGLH RLGGLPGLAM SVKTEERLWF ALSMIVIALA
YHGARRAIRR EDPVCALAVV AACQLLISPV SWSHHWVWIA PMLLPFAIQI VRGGERLKIA
GLVVLTAVFL IGPLLLFPVD HGLEMHWGWW ENLIGDAYLI ITLSFVVWAA STRRTPAPVR