Gene Caci_5404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5404 
Symbol 
ID8336758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6228650 
End bp6229630 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID644958502 
ProductMg2 transporter protein CorA family protein 
Protein accessionYP_003116104 
Protein GI256394540 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0808766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG ACTGTGCGAC CTACCAGAAC GGCCGCCGCG TGGCCGCGCC CGAGGACCTG 
TCCGACGCGC TCGCGCAGGC CCGGAGCTGC GGAGACCCCT CAGCGTTCCT GTGGCTGGGG
CTCTTCGAGC CGGAGCCGGA CGAGTTCGAC CTGGTGGCGC GCGAGTTCGG ACTGCACCCG
CTGGCGGTGG AGGACGCGGT CAGCGCGCAT CAGCGACCCA AGATGGAGCA CTACAAGGGC
TCGACGTTCC TGGTGTTCAA GACGCTGCTG GAAGCCGATC CGCACCATCC GCTCCAACTC
GGCGAGATCT CGGTGTTCCT CGGCGAGAAC TTCGTCATCA CGGTCCGCCA CGGCTCGGCC
AATCCGCTCT CCGGCGTGCG GCACCGCGTC GAAGGCGATC CCGGTCTGCT GGAGCACGGA
CCGAGCACGG TGCTGTACGC GGTCGCCGAC AGCATCGTGG ACACCTACAC CACCTACGCG
CAGCTGATGC AGGACTCGAT CGACCAGCTG GAGACCGAGG TCTTCTCCCC CGTCCGCGGC
GACTACGGCG GGCCGATCTA CTCGCTCAAG CGCAACGCGA TCGTCTTCGC GCGCGCCGTG
ATGCCGCTGG TGATGCCGAC GAAGGCACTG GTCGCCGGGG AGGAGGACCG GGTCGCCAAG
GAGTCCCAGC CCTACTTCCG GGACGTCGCC GACCACGTGC TGCGCGCCAC CGACGCCGCG
CGGGAGTGGA ACGAGCTGCT GGACCACATG CTGGATTCGG ACCGCTCGCG GGTCTCGGTG
CAGCAGAACG ACGACATGCG GCGGATCTCG GCGTGGGCGG CGATCCTGGC GGTGCCGACG
GCGATCGCCG GGATCTACGG GATGAACTTC GACGACATGC CCGAGCTGCA CTACCACTAC
TCGTACTACA TCGTGCTCGG GGTCATGGCG ACGTCGTGCG TGGTGCTGTA CGTGCTGTTG
AAGCGGGCGA AGTGGCTGTG A
 
Protein sequence
MIVDCATYQN GRRVAAPEDL SDALAQARSC GDPSAFLWLG LFEPEPDEFD LVAREFGLHP 
LAVEDAVSAH QRPKMEHYKG STFLVFKTLL EADPHHPLQL GEISVFLGEN FVITVRHGSA
NPLSGVRHRV EGDPGLLEHG PSTVLYAVAD SIVDTYTTYA QLMQDSIDQL ETEVFSPVRG
DYGGPIYSLK RNAIVFARAV MPLVMPTKAL VAGEEDRVAK ESQPYFRDVA DHVLRATDAA
REWNELLDHM LDSDRSRVSV QQNDDMRRIS AWAAILAVPT AIAGIYGMNF DDMPELHYHY
SYYIVLGVMA TSCVVLYVLL KRAKWL