Gene Caci_5386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5386 
Symbol 
ID8336740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6210014 
End bp6210769 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content73% 
IMG OID644958484 
ProductSiderophore-interacting protein 
Protein accessionYP_003116086 
Protein GI256394522 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0562315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGCA CCCTTCACCA GTTCGTCGTG CGCCGCACGG AGCGCCTGAA CGACCACCTG 
ATCCGGGTGC ACCTCGGCGG TCCCGGATTC GCGGCGTTCC AGCCCAGCGA ATTCACCGAC
TCCTACGTCA AACTGCAGGT CCCCGGCCCG GACGGCGATA CCACGCGCAC CTACACGGTG
CGCGCCGTGG ATACCGCCGC CGAGACCATC GCGATCGACT TCGTCTACCA CGGCGCGGAG
GGCGTCGCGG GTCCCTGGGC CGCCGCCGCC CGGCCGGGCG ACGCCATCGG GCTGTCCGGT
CCCGGCGGCG CCTATGCCCC GCGCGCCGAC GCCGACTGGC ACCTGCTGGC CGGCGACATC
TCGGCGCTGC CGGCGATCTC CGCCGCGTGC GCCGCGTTGC CGGCGAACGC CGTCGGCCGG
GTCTTCGTCG AGGTCGCAGG TCCCGCCGAC GAGCTCGATT TCGCGCGCCC CGAAGGCGTC
GAGCTCACCT GGCTGCACAC CGGCGGCGCC GAGCCGGGTG CCCTGCTGGT CGAGGCGGTC
CGCGCCGAAC CGTGGCGCGA CGGACTGGTC CACGTCTTCA TCCACGGCGA GGCGCAGGCG
GTCATGCACA ACCTGCGTTC CTACATCCGC AAGGAGCGCG GCGTCCCGGC CGATTGGGCG
TCGATCTCCG GCTATTGGCG CCGCGGCCGC ACCGAGGAGG GCTTCCGGCA GTGGAAGCGC
GATCTCGCCG AGCGTGAGGC GGCGACGGTC GGGTAG
 
Protein sequence
MARTLHQFVV RRTERLNDHL IRVHLGGPGF AAFQPSEFTD SYVKLQVPGP DGDTTRTYTV 
RAVDTAAETI AIDFVYHGAE GVAGPWAAAA RPGDAIGLSG PGGAYAPRAD ADWHLLAGDI
SALPAISAAC AALPANAVGR VFVEVAGPAD ELDFARPEGV ELTWLHTGGA EPGALLVEAV
RAEPWRDGLV HVFIHGEAQA VMHNLRSYIR KERGVPADWA SISGYWRRGR TEEGFRQWKR
DLAEREAATV G