| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5363 |
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| Symbol | |
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| ID | 8336717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6181563 |
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| End bp | 6185072 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958461 |
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| Product | methionine synthase |
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| Protein accession | YP_003116063 |
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| Protein GI | 256394499 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.816675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCGA CCGCCGCCCC TTCCGCGCAC GCCGGAAACG CCCGGATCGC CGCACTCCGC
GAAGCACTCC GGACCAGGGT GGTGGTCGCC GACGGAGCCA TGGGCACCAT GCTGCAGGCG
CAGAATCCCA CGCTGGACGA CTTCCAGGGC CACGAGGGCT GCAACGAGAT CCTGAACATC
TCCCGCCCCG ACATCGTGCA GACCGTCCAC GAGGAGTACT TCCGCGCCGG CGTGGACTGC
GTGGAGACCA ACACCTTCGG CGCGAACCAC ACCAACCTCG GCGACTACGA CATCTCCGAC
CGCGTCTTCG AGCTCTCCGA AGCCGGCGCC CGGCTGGCCC GCGAGGTCGC CGACGGCTTC
GCCACCGCCG ACAAGCCGCG CTGGGTGATC GGCTCCATCG GTCCGGGGAC CAAGCTGCCG
TCGCTGGGCC AGATCGGCTA CGCCACCCTG CGCGACGCCT ACCAGGCCGA GGCCGCCGGG
CTGATCGCCG GCGGCGCGGA CGCCCTGCTG GTGGAGACCA GCCAGGACCT GCTGCAGATC
AAGGCCTCGG TGCTGGGGGC GAAGGCCGCG GCGCGCGCCG CCGGGATCGA CGTCCCGGTC
TGGGCCTCGG CGGCGTTCGA GACCACCGGC ACGATGCTGC TGGGCACCGA GGTCGGCGCG
GCGCTGACCG CGCTGGAGTC CCTGGGCATC GAGCGCATCG GACTGAACTG CTCCACCGGC
CCGGCCGAGA TGAGCGAGCA CCTGCGCTAC CTGGCCAAGC ACTCCACCAT CGGGCTCTCC
TGCATGCCCA ACGCCGGACT TCCGGTGCTG ACCTCCGACG GCGCGCACTA TCCGCTGAGC
CCGGAGGAGC TCGTGGACTG GCACGCGCGG TTCGTCGACC AGTTCGGCAT CGCGCTCATC
GGCGGCTGCT GCGGCACCAC CCCGGAGCAC CTGCGGCAGT TGGTGGAGAG CCTCGGCGGC
CGGGAGGTGC CGCAGCGCGA TCCCAAGCGC GAGCCCGGGG CGTCCTCGCT GTATCAGCAC
GTGCCGTTCC GGCAGGACAT CAGCTATCTG GCGATCGGCG AGCGCGCGAA CACCAACGGC
TCCAAGGCGT TCCGCGAGGC GCTGCTGGCC GAGAACTGGG ACGCGTGCGT GGAGATCGCC
CGCAACCAGA TCCGCGACGG CGCGCACATG CTCGACCTGT GCGTGGACTA CGTCGGCCGC
GACGGCGTCC GGGACATGCA GCAGGTCGCC AGCCGCTTCG CGACCGCCTC CACGCTGCCG
ATCGTGCTGG ACTCCACCGA GCCGCAGGTG CTGCAGGCCG GGCTGGAGAC GCTCGGCGGG
CGCGCCGTGA TCAACTCGGT GAACTACGAG GACGGCGACG GACCGACCTC GCGCTTCGCC
CGCATCATGG AGCTGGTGTC CGCGCACGGC GCCGGCGTCA TCGCCCTGAC CATCGACGAG
CAGGGCCAGG CGCGCACCGC CGAGCACAAG GTGGCGATCG CCGAGCGGCT GATCGAGGAC
ATCACCGGCA ACTGGGGCGT CCCGGAGGAC TCGATCCTCG TGGACTGTCT GACCTTCACC
ATCTGTACCG GGCAGGAGGA GTCGCGCCGC GACGGCCTGG AGACCATCGA GGGCATCCGG
GAGCTGAAGC GCCGGCACCC GGACGTGCAG ACCACGCTGG GCCTGTCGAA CATCTCCTTC
GGCCTGAACC CCGCCGCGCG CCAGGTCCTG AACTCGGTGT TCCTGCACGA GTGCGTCGAG
GCCGGACTGG ACTCGGCGAT CGTCCACGCC TCCAAGATCC TGCCGATCGC CCGCATCCCG
GAGGAGCAGC GCAAGACCGC CCTGGACCTG GTCTACGACC GCCGCGCCGA GGGCTACGAC
CCGCTGACCC GGCTGCTGGA GCTGTTCGAG GGCGTGGACG CGGCCTCCCT GAAGGCCTCG
CGCGCCGACG AGCTGGCCGC GCTGCCGCTG AACGAGCGCC TCAAGCGCCG CATCATCGAC
GGCGAGCGCA AGGGTCTGGA GGCCGACCTG GACGAGGCGC TCGGCGAGCG TCCGGCGCTG
GAGATCGTCA ACGAGGTGCT GCTGGACGGC ATGAAGACGG TCGGCGAGCT GTTCGGCTCC
GGGGAGATGC AGCTGCCGTT CGTGCTGCAG AGCGCGGAGA CCATGAAGAC CGCGGTGGCG
CACCTGGAGC CGCACATGGA GAAGTCGGAC TCCACCGGCA AGGGCACGAT CGTGCTCGCC
ACGGTGAAGG GCGACGTCCA CGACATCGGC AAGAACCTGG TCGACATCAT CTTGTCGAAC
AACGGCTACA ACGTGGTCAA CCTCGGCATC AAGCAGCCGC TGCAGACCAT CCTGGACGCC
GCCGAGGAGC ACGCCGCCGA CGCCATCGGG ATGTCCGGGC TGCTGGTGAA GTCCACGGTG
GTGATGAAGG AGAACCTCGA GGAGATGAAC ACCCGCGGGG TGGCGGACCG CTGGCCGGTG
CTGCTCGGCG GCGCCGCGCT CACCCGCGCC TACGTCGAGC AGGATCTCGC CGAGCTGTAC
GACGGCGAGG TCCGCTACGC CCGCGACGCG TTCGAGGGAC TGAACCTGAT GGACGCGGTC
GCGGCGGTGA AGGCCGGCGT GCCGGGGGCG TCCCTGCCCG CGCTGCGTCC GCGCCGGGTG
AAGGCCTCCG GGCCGCTGCG CGAGATCCCG GACGAGCCGA TCCCGGCGCG CTCCGACGTC
GCGCTGGACA ACCCGATCCC CGCGCCGCCG TTCTGGGGCG ACCGCATGGT GAAGGGCATC
CGGCTGGCGG AGTACGCGCC CTACCTCGAC GAGCGCGCGC TGTTCCTCGG ACAGTGGGGA
CTCAAGCCCG GGCGCGGCTC GGGCGGGCGT TCCTATGAGG AACTAGTCGA GACCGAGGGA
CGCCCGCGCC TGCGGATGTG GCTGGAGCGT CTGCAGACTG AGAACCTGCT GGACGCGGCG
GTGGTCTACG GCTACTTCCC GGCGGTGAGC AAGGGCGACA GCCTGCTGAT CCTGGACGAG
AGCGGGGAGC AGCGGACCAG CTTCACGTTC CCGCGTCAGC GGCGTGACCG TCACCTGTGC
CTGTCGGACT TCTGGCGTCC GCAGGAGAGC GGGGAAGTGG ACGTCGCGCC GTTCCAGCTG
GTGACGGTCG GCGCGCGGAT CGCCGAGGCG ACCGGGGAGC TGTTCGCCGC GAACTCCTAC
CGCGAATACA TGGAGCTGCA CGGCTTGTCG GTGCAGCTGG CCGAGGCGCT GGCTGAGTAC
TGGCACGCGC GGGTCCGCGA CGAGCTCGGC TACGCCGCGG AGGACCCGGA GTCCACGGAG
GGTCTGTTCA AGGTGGAGTA CCGGGGATGC CGGTACTCCT TCGGATATCC CGCGTGCCCG
GACCTGGAGG ACCGGACGAA GATCGTGGAG CTGCTGAAGC CGGAGCGGAT CAACGTGCAG
CTGTCGGAGG AGTACCAGCT GCACCCGGAG CAGTCGACGG ACGCGATCGT CGCGCACCAC
CCGGAGGCTT CGTACTTCAA CGCGGGGTGA
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| Protein sequence | MASTAAPSAH AGNARIAALR EALRTRVVVA DGAMGTMLQA QNPTLDDFQG HEGCNEILNI
SRPDIVQTVH EEYFRAGVDC VETNTFGANH TNLGDYDISD RVFELSEAGA RLAREVADGF
ATADKPRWVI GSIGPGTKLP SLGQIGYATL RDAYQAEAAG LIAGGADALL VETSQDLLQI
KASVLGAKAA ARAAGIDVPV WASAAFETTG TMLLGTEVGA ALTALESLGI ERIGLNCSTG
PAEMSEHLRY LAKHSTIGLS CMPNAGLPVL TSDGAHYPLS PEELVDWHAR FVDQFGIALI
GGCCGTTPEH LRQLVESLGG REVPQRDPKR EPGASSLYQH VPFRQDISYL AIGERANTNG
SKAFREALLA ENWDACVEIA RNQIRDGAHM LDLCVDYVGR DGVRDMQQVA SRFATASTLP
IVLDSTEPQV LQAGLETLGG RAVINSVNYE DGDGPTSRFA RIMELVSAHG AGVIALTIDE
QGQARTAEHK VAIAERLIED ITGNWGVPED SILVDCLTFT ICTGQEESRR DGLETIEGIR
ELKRRHPDVQ TTLGLSNISF GLNPAARQVL NSVFLHECVE AGLDSAIVHA SKILPIARIP
EEQRKTALDL VYDRRAEGYD PLTRLLELFE GVDAASLKAS RADELAALPL NERLKRRIID
GERKGLEADL DEALGERPAL EIVNEVLLDG MKTVGELFGS GEMQLPFVLQ SAETMKTAVA
HLEPHMEKSD STGKGTIVLA TVKGDVHDIG KNLVDIILSN NGYNVVNLGI KQPLQTILDA
AEEHAADAIG MSGLLVKSTV VMKENLEEMN TRGVADRWPV LLGGAALTRA YVEQDLAELY
DGEVRYARDA FEGLNLMDAV AAVKAGVPGA SLPALRPRRV KASGPLREIP DEPIPARSDV
ALDNPIPAPP FWGDRMVKGI RLAEYAPYLD ERALFLGQWG LKPGRGSGGR SYEELVETEG
RPRLRMWLER LQTENLLDAA VVYGYFPAVS KGDSLLILDE SGEQRTSFTF PRQRRDRHLC
LSDFWRPQES GEVDVAPFQL VTVGARIAEA TGELFAANSY REYMELHGLS VQLAEALAEY
WHARVRDELG YAAEDPESTE GLFKVEYRGC RYSFGYPACP DLEDRTKIVE LLKPERINVQ
LSEEYQLHPE QSTDAIVAHH PEASYFNAG
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