Gene Caci_5353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5353 
Symbol 
ID8336707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6169624 
End bp6170019 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content66% 
IMG OID644958451 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003116053 
Protein GI256394489 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.657769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.551458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG ACAATTACTC CCCGGCGCAA ACGGTCGAAA TGTCTGGCTT TTCGCTCGAT 
ACGCTGCGCT ACTACGAGAA GATCGGCCTC ATCGAGCCCG TCCGGCGGGC CGCAGGCGGC
CACCGCCGCT ACACCGACGA CGATCTGGGC TGGCTCGACA TGCTCCGCTG CCTGCGGGGC
ACCGGCATGC CCATCGCGCA GATGCAGACC TTCGCCGAGC TGGTCCGCGA CGGCGACGGC
ACGGTCACCG ACCGCCTGGC GCTGCTGGAG GAGCACGACG CCAACGTCGA GGCGGAGATG
GAGCGGCTGA TCGAACTGCG GCGGAAGATC CAGGAGAAGA TCGCCTACTA CCGGTCATAT
CTGGCGGAGA TGCCGGTGGA GTGCGTGCGG GAGTAG
 
Protein sequence
MTIDNYSPAQ TVEMSGFSLD TLRYYEKIGL IEPVRRAAGG HRRYTDDDLG WLDMLRCLRG 
TGMPIAQMQT FAELVRDGDG TVTDRLALLE EHDANVEAEM ERLIELRRKI QEKIAYYRSY
LAEMPVECVR E