| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5330 |
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| Symbol | |
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| ID | 8336684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6144087 |
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| End bp | 6145403 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958428 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003116030 |
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| Protein GI | 256394466 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.489769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.341368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGGG CACGGAAGCG TTCTGCCGCG GCAATCGCCC TGCTCGTCTC CGGCGCGATG
CTCGCGTCCG GGTGCAGCAG CAGCAAGTCG TCCTCGTCAA GCACCAAGAC CACCACCGAC
AGCGGCCAGC AGATCACGCT GAAGGTCGGC CTGTTCGGGA CGTTCGGCTT CAAGGAGGCC
GGACTTTACG ACCAGTACAT GAAGCTGCAC CCGAACATCA AGATCGTCGA AGACAGCGTC
GAGGACGAGG GCCAGTACTA CACCTCGCTG CAGACCCACC TGTCGGCCGG CAGCGGCCTG
GACGACATCC AGGGCATCGA GGTCGGCCGC ATCGCCGACG TCGACCAGAA CCTCTCCAGC
AAGTTCGTCG ACCTGAACTC CCTGGGCGCG GCGAGCCTGA AGAGCAACTT CTACCCGGCG
AAGTGGTCCG CCGCGACCAC CTCCGACGGC AAGGTCATGG CGCTGGGCAC GGACTACGGA
CCGCTGGCCA TCTGCTACCG CACCGACCTG TTCAAGGCCG CGGGCCTGCC GACCGACAGC
GCCGGTGTCA GCGCGCTGTG GCCGGACTGG AACAGCTACG TCCAGACCGG GCTGAAGTAC
AAGGCGAAGG CTCCGGCCAA CCAGGCCTGG ACCGACACCG CCGGCGGTAC GTTCAACGCG
ATCGTCGGAC AGTCGGCGAA CCAGTACTAC GACAGCTCCG GCAAGGAGAT CGCGGACACC
AACCCGGCCG TGCAGAACGC CTGGAACATC GCGATGCAGC TGTCCACCCA GGGTCTGACC
GCGAAGCTGA GCCAGTTCAC GCCGGCCTGG AACCAGGCCT TCACCACCGG CTCGTTCGCC
ACGATCGCGT GCCCGGCGTG GATGACCGGC TACATCAAGA GCGAGGCCGG GGCGATGACC
GGCGACTGGG GCGTGGCCAA GATCCCCGGC GGCACCGGCG ACTGGGGCGG GTCCTACCTG
GCCATCCCCA AGGCTTCCAA GCACCAGAAG GAGGCCTACG ACCTGATCAA CTGGCTGACC
AACCCGGACC AGCAGAAGAC CATGTTCACC AGCCAGGGCC ACTTCCCGTC CTCGCAGACG
GCGGCCCAGG ACCCGTCCAT CGCCTCGCAC ACCGACCCCT ACTTCGGCGA CTCGCCGCTG
GGTCAGATCT ACGCCGCCTC CGCGGCCACG ATCCCGCAGG CCGTGCTCGG CGCCAAGGAC
GGGACGATCA AGGACACCTT CTCCAAGGCG ATCACCCGCG TGGAGGCCCA GGGCCAGGCG
CCGCAAGCCT CGTGGACGAA GGCCTTGTCC GACATCAAGG CCGCTACCAG CGGCTGA
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| Protein sequence | MLRARKRSAA AIALLVSGAM LASGCSSSKS SSSSTKTTTD SGQQITLKVG LFGTFGFKEA
GLYDQYMKLH PNIKIVEDSV EDEGQYYTSL QTHLSAGSGL DDIQGIEVGR IADVDQNLSS
KFVDLNSLGA ASLKSNFYPA KWSAATTSDG KVMALGTDYG PLAICYRTDL FKAAGLPTDS
AGVSALWPDW NSYVQTGLKY KAKAPANQAW TDTAGGTFNA IVGQSANQYY DSSGKEIADT
NPAVQNAWNI AMQLSTQGLT AKLSQFTPAW NQAFTTGSFA TIACPAWMTG YIKSEAGAMT
GDWGVAKIPG GTGDWGGSYL AIPKASKHQK EAYDLINWLT NPDQQKTMFT SQGHFPSSQT
AAQDPSIASH TDPYFGDSPL GQIYAASAAT IPQAVLGAKD GTIKDTFSKA ITRVEAQGQA
PQASWTKALS DIKAATSG
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