Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5316 |
Symbol | |
ID | 8336670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6128204 |
End bp | 6129922 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958414 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003116016 |
Protein GI | 256394452 |
COG category | [R] General function prediction only |
COG ID | [COG2270] Permeases of the major facilitator superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCG ACGACACCGC CGCCGCGTTC ACCGCCGACG GCGCCGACTC CGGCACCGGC GCGGCCGCCG CACTCGCCGG GTTGGGGGCG CACCCCGCGC AGCCGCCGAC AGGGATCGGC ATACCCTTCG CCGATCCGGC AGCGCATGGT TCGCAAGGTA TCGCCGCGCA GCCGCTGAGC ATCGCCGATC CAGCCGGCAC CGCGACACCG TTCGCCGGGC AGGCGTCCTT CACGCGCTCT CCGTCCGCCG AAGAGACCGC CGACTTCGGC ACACCGCTCG CCGACCCTGC CGCACTCGCC TCATCGCCCG CCGCCGGACC CGACGCGCCC GACATCCCCA CCCCCACCAC TGACCCGGCC CAGCTCTCCC GCCGCACCGG CTGGTACCGC TACGCCTGGG GCGCCCACGC CTTCCCCACC ACCGTCACCG CGGTCTTCCT CGGTCCCTAC CTCACCGACA TCGCGCGCAA CGCCGCCGGC GGGACCGACC ACTACCTGCA CCTGGCGGGC CTGAGCATCC GGGCCGAGTC CTTCTACCCC TTCGCCGTCA CCGCCGCCGC GCTCGTGCAG GCCGCGGTGC TGCCGTTGGT CGGCGCGGTC GCCGACCGCA GCGGGCGCAC GCGCGGGCTG CTGACCGCGG CGATGACCCT CGGTGTCGTG GCGACGCTGC TCTTCTACAC CGTCACCGGC GGCGCGTACC TGTGGGGCGG CGCGCTGTTC CTGACCGCCT CGCTGAGCTA CTCCACCGCC AACGTGCTGG CCAACGGCTA TCTGCCGACG CTGGCCGCGC CGGACGAGCG CGACGCGATC AGCTCCAAGG GCTGGGCTGT CGGCTATCTC GGCGGCGCCG TGCTGCTCAC CGTCAACCTG GTCGTCTACA CGGCGCACAG CTCTCTGGGA CTAAGCGAGG CGCACGCCGC CCGGGTCGCG CTGGCCTCGG CGGGTCTGTG GTGGCTGGTG TTCGGCACGG CCGGCGTGCG CAGGCTGACC GCGGGGACCT CCCGGCTGCC GGAGTCCGAG CTGTCGAAGT CTGGGCTGCC TAAGTCTGAG CTGTCGAAGT CCGAGCGTCC GGAGTCCGGG ACCGGCTACC GCCGACTCGG CCGAACTCTG GCCGCGCTGT CGCGCAACCG CAACGCTTTG CTGTTCCTAC TCGCCTACAT GGCCTACAAC GAGGGCGTGC AAACGGTCAT CTCTTTCGCC TCGACCTACG GCACCAAACA GCTGGATCTG GGCCAGTCGG TGATGGCCAG CGCGATCCTG GTGGTGCAGT TCGTGGCGTT CGGCGGCTCG CTGTGGATGG GGCGGCTGGC CGCGCGGCAC GGCACGCGGC GGACCATCAG CGGCTCGCTG GTGGCGTGGA TCGTGCTGCT GGCGGCGGCG TTCGCGATGA CCAAGCACGC CGCCTGGCAG TTCTACCTGC TGGGCTGCGC GATCGGCCTG GTGCTGGGCG GGACGCAGGC GCTGTCGCGC TCGCTGTTCG CGCAGATCAT CCCGGCCGGG CAGGAGAGCG AGTATTTCGG GCTCTACGAG GTCAGCCAGA ACGGCGTGGC CTGGATCGGC TCGCTCACCG TGGCGCTGGC GATCCAGTTC ACCGGCTCCT ACCGGCTGGC GATCGTCTCA CTGGTGGTGT TCTTCGTCCT GGGGTTGGCG CTGCTGGCGC GCACCGATCT GCGCGCCGCG ATCCGGGCCG CGGGCAATCC CGTGCCCGAG CGCTTGTAA
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Protein sequence | MPIDDTAAAF TADGADSGTG AAAALAGLGA HPAQPPTGIG IPFADPAAHG SQGIAAQPLS IADPAGTATP FAGQASFTRS PSAEETADFG TPLADPAALA SSPAAGPDAP DIPTPTTDPA QLSRRTGWYR YAWGAHAFPT TVTAVFLGPY LTDIARNAAG GTDHYLHLAG LSIRAESFYP FAVTAAALVQ AAVLPLVGAV ADRSGRTRGL LTAAMTLGVV ATLLFYTVTG GAYLWGGALF LTASLSYSTA NVLANGYLPT LAAPDERDAI SSKGWAVGYL GGAVLLTVNL VVYTAHSSLG LSEAHAARVA LASAGLWWLV FGTAGVRRLT AGTSRLPESE LSKSGLPKSE LSKSERPESG TGYRRLGRTL AALSRNRNAL LFLLAYMAYN EGVQTVISFA STYGTKQLDL GQSVMASAIL VVQFVAFGGS LWMGRLAARH GTRRTISGSL VAWIVLLAAA FAMTKHAAWQ FYLLGCAIGL VLGGTQALSR SLFAQIIPAG QESEYFGLYE VSQNGVAWIG SLTVALAIQF TGSYRLAIVS LVVFFVLGLA LLARTDLRAA IRAAGNPVPE RL
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