Gene Caci_5315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5315 
Symbol 
ID8336669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6127410 
End bp6128204 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID644958413 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003116015 
Protein GI256394451 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.565842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA GCACCGCCCG CCACGCGTTC CTCGACCATC CCGGACCCAT CCCGTTCGCC 
CACCGGGGCG GCGCGGACGG CCCGGCCGGG GAGAACACGC TGTCCGCGTT CAAGATCGCC
GCCGACACCG GCTACCGGTA TCTGGAGACG GACGTGCACG CCACCTCCGA CGGCGTCCTG
CTCGCCTTCC ACGACCGGCG GCTGCAACGC GTCACCGACG CCAAGGGGCG CATCAAGACG
CTCACCGCCG CCGAGGCCGC CATCGCCCGC ATCGGCGACG ACCCGATCCC GACGATGGCC
GAACTGCTGG AGGCCTTCCC CGACGCGCGC TTCAACATCG ACGTCAAGGA GCCGAACGCG
ATCGAGCCGC TGACCGCGCT GCTGCGGCGC ACCGACGCGG TCGAGCGGGT CTGCATCAGC
TCCTTCTCCG ACACCCGGCT GAACGCGATG CGCGCGGCGT TCGGACCCGA GCTGTGCACC
AGCGCCGGTC CGCGCGAGGC GTTCCGCATC TGGCGTGCCT CGCGCAGACT GAAGCTCGGC
GAGACGCCGG ATCCGGCCGC GCTGCCCCAC GTCGCGGCGG CGTGTCTCCA GGTCCCGCCG
GCTCTGGGAC GCATCGTCGT GGTCGACGAC CGGCTGCTCG CCGCCGCCCA CGCCGCCGGA
CTGCCGGTGC ACGTGTGGAC CGTCAACGAG GCCTCTGACA TGGAACGGTT GCTGGACCTG
GGCGCGGACG GCATCATGAC CGACCGGCTG GACACGCTCA AAACCGTGCT GACGAAACGG
GGGACCTGGT CCTGA
 
Protein sequence
MSASTARHAF LDHPGPIPFA HRGGADGPAG ENTLSAFKIA ADTGYRYLET DVHATSDGVL 
LAFHDRRLQR VTDAKGRIKT LTAAEAAIAR IGDDPIPTMA ELLEAFPDAR FNIDVKEPNA
IEPLTALLRR TDAVERVCIS SFSDTRLNAM RAAFGPELCT SAGPREAFRI WRASRRLKLG
ETPDPAALPH VAAACLQVPP ALGRIVVVDD RLLAAAHAAG LPVHVWTVNE ASDMERLLDL
GADGIMTDRL DTLKTVLTKR GTWS