Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5315 |
Symbol | |
ID | 8336669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6127410 |
End bp | 6128204 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958413 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003116015 |
Protein GI | 256394451 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.565842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCA GCACCGCCCG CCACGCGTTC CTCGACCATC CCGGACCCAT CCCGTTCGCC CACCGGGGCG GCGCGGACGG CCCGGCCGGG GAGAACACGC TGTCCGCGTT CAAGATCGCC GCCGACACCG GCTACCGGTA TCTGGAGACG GACGTGCACG CCACCTCCGA CGGCGTCCTG CTCGCCTTCC ACGACCGGCG GCTGCAACGC GTCACCGACG CCAAGGGGCG CATCAAGACG CTCACCGCCG CCGAGGCCGC CATCGCCCGC ATCGGCGACG ACCCGATCCC GACGATGGCC GAACTGCTGG AGGCCTTCCC CGACGCGCGC TTCAACATCG ACGTCAAGGA GCCGAACGCG ATCGAGCCGC TGACCGCGCT GCTGCGGCGC ACCGACGCGG TCGAGCGGGT CTGCATCAGC TCCTTCTCCG ACACCCGGCT GAACGCGATG CGCGCGGCGT TCGGACCCGA GCTGTGCACC AGCGCCGGTC CGCGCGAGGC GTTCCGCATC TGGCGTGCCT CGCGCAGACT GAAGCTCGGC GAGACGCCGG ATCCGGCCGC GCTGCCCCAC GTCGCGGCGG CGTGTCTCCA GGTCCCGCCG GCTCTGGGAC GCATCGTCGT GGTCGACGAC CGGCTGCTCG CCGCCGCCCA CGCCGCCGGA CTGCCGGTGC ACGTGTGGAC CGTCAACGAG GCCTCTGACA TGGAACGGTT GCTGGACCTG GGCGCGGACG GCATCATGAC CGACCGGCTG GACACGCTCA AAACCGTGCT GACGAAACGG GGGACCTGGT CCTGA
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Protein sequence | MSASTARHAF LDHPGPIPFA HRGGADGPAG ENTLSAFKIA ADTGYRYLET DVHATSDGVL LAFHDRRLQR VTDAKGRIKT LTAAEAAIAR IGDDPIPTMA ELLEAFPDAR FNIDVKEPNA IEPLTALLRR TDAVERVCIS SFSDTRLNAM RAAFGPELCT SAGPREAFRI WRASRRLKLG ETPDPAALPH VAAACLQVPP ALGRIVVVDD RLLAAAHAAG LPVHVWTVNE ASDMERLLDL GADGIMTDRL DTLKTVLTKR GTWS
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