| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5311 |
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| Symbol | |
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| ID | 8336665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6120226 |
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| End bp | 6123084 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644958409 |
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| Product | protein serine phosphatase with GAF(s) sensor(s) |
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| Protein accession | YP_003116011 |
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| Protein GI | 256394447 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCGG CGTTCGACCT CTCCGGTTTC TCGGTCACCG ACATGGTCGT CGCCTCCGGC
GAGCTCCGGG CCGTCACCGC CGGAGCCGCC TCCATGGAGG AGGGCTCGGC GGCGATCGTC
GAGTGGCTGC GGCACGCCTT CACCGACCCG GCGACCGGCC GCCCGGCCTT CGCGCTGGCC
CGGATGTTCC ACACTGTCAC CTGGGACCGG CTGACCCCGG ACCTGCGCTC CTATGTCGGC
ACCCGGGATC CGGCGGCGGC CGCGAACGAC GACGGCCTGC CGTATCTGAC GCTGCTGGCC
ACCTCCGGGG ACCATCCGCA CTGGTCGGAC CGCCGCAACA GCCGCGACCA CCAGGCGATC
CCGCTGTCCG CCTCGGACGT GGTGCGGCGC GCGCCGCTCG CGCTTGCGCT GCTGGACCGG
CTGCTGGGCT TGCAGCCCTC GCCGGAGCCG GTGCCGGCGC GGCCGCACGG CGGCGAGTCG
CCGGCCGCCT CGGCGCGGCT GCGGGACCGG TTCGACGTCT TCCACGTGCC CGAAGCCCTC
GGCAGCCCGT ATGTGCCGAC CCCTGAGTTC GTCCGCGACT ATCAGATCCG CTCGGCGATC
GCGCTGGGCG CGGTGCTGGA CTCCGGCGGG CCGGACCACC CGGACCTGCC CGGGGTGCGG
AACACCTCGC TGTACACGGC GCTGCTGTAT TCGCGCGTCC GCATCCCGGC CGAGACCGCG
ACGCACTTCC GGACGCTGGC CGCGGCGATC CGGCTGGCGC TGACCCCGCT GCTGGCCGTG
CCCTTGTTCG CGCCCTCGTC CCCGGCGGCG GGGCACCAGG TGTTCGGCGC CCGCAACGGG
AACGGCTCGG GGACCGGCCT CGGCAACGGC GTGGCCGGGG CGCCGACCGG GAACGGCGCG
CCGCCGGCCG CCGGCTCCGC GCCCGCGGGG AACGGCGCGG CCGGCAACGG CGCCGCCGGG
AACGGGCACC GGCCGTCGGT GAACCTGGTC CCGCAGCAGG CCTCGGCGCC GCCTCCGTCG
TCCTCCTCGG TCCCGGCCGC CGCCGGCGAC GGCAACGCTG CGGCGCTGGC CGCCGAAGCC
GAGCTGCGCG CCTCGCAGCG GCGGCTGACG CAGGAGACCC GGATCGTCGA GACGCTCTAC
ATGATCGGGC AGTCTCTGCA CCGGGAGCTG GACACCCGCA AGATCGCCAA GCTCGCCACG
GACGCCGCGA CCACCGCGAT CGACGCCGAG TTCGGGTCCT GCTTCTACAC CCTGACCTCC
GCCAACGGCC AGGCGCAGAC CCGGTTCGCG CTGGCCGGGA CGGTCCCGGC GGAGCGCTTC
GAGAACCTGC CGATGCCGCG GCCGACCTCG CTGGTGGGCG CGGCGTTCCC CGGGACCGCG
CCGATCCGCT CCGGCGACGT CACCGCCGAC CCGCGCTACG GCCAGCGCGC GCCGTTCCAC
GGCCTGCCGC CGGGACACCC GCCGGTGAAG TCCTTCCTGG CGCTGCCGAT CACCACGATC
GGCGGCACGG TGCTGGGCTC GATGTACTTC GGCCACTCCG AACCGAACCG GTTCACCGAG
CGCGACGAGC AGATCGTTAA GGGCATCGCC GGGCAGGCGG CCTCGGCGAT GGACAACGCG
CGGCTGTACC GGCTGGAGCG CGAGACCGCG GTGGAGCTGC AGAACTCGCT GCTGCCGGCG
TCCCCGCCGC AGCTGGCGGA GCTGGAGATC GCCTTCACCT ACCTGGCCGG CGCGCAGGGC
ACGCAGGTCG GCGGCGACTG GTTCGACGTG ATCCCGCTGT CCGGCGGCCG GGTGGCGCTG
GTCATCGGGG ACGTGATGGG GCGCGGGATC CGGGCCGCGG CGATCATGGG GCAGCTGCGG
ACGGCGGTGC GCGCGTACGC GGTGATGGAC CTGCCGCCGG GGCAGATCAT GCATCTGCTG
AACCGGCTGG TGTGCACCAT GCCGGCCTCG GCGGCGAGCA GCTCGGTGGC GGTGACCACG
CTGAGCGCCT CCGGGACGTA CCCGGTCGGC ACCGGGGCGC TGGGACCGGC CGACGACGGC
GTCGCCGAGC AGATCGCGAC GTGCGTGTAC GCCGTCTACG ACCCGGCGGA GGAGGTCCTG
ACCTGGGCCA GCGCCGGGCA CATGCCGCCG GCGCTGATCA CCCCGGAGGG CACGGCGCAC
CTGCTGGAGG ACGACCTCGG GATGCCGCTG GGCATCGAGG AGGCGGTGTT CGACGAGAAG
GTGCAGACCC TGGCCGGCGG CAGCAGGCTG CTGCTGTACA CCGACGGCCT GGTGGAGTGC
CACGACGCGC CGCTGACCGA GCGGCTGAAC CGGCTCTCCA CGGAGCTGGT CCGCTCCGAC
GACGGACCGC TGGGTTCCTC CGGACCGCTG AGCTCGGAGA GCGTGCAGCG CACCTGCGAC
CGCCTGCTGC ACGCGATGCT CTCCGGCGAC GAGCACGACG ACGTGGCGCT GCTGATGGTG
CGGACCCGCC CGACCCGCAT CCGCAAGGCG GCGCTGGACC TGGACCCGGA CCCGATGGCG
GCGCGCGCCG CGCGGCGGTT CGTCACCGCG ACGCTGAGCG AGTGGGACCT GGACCACCTG
ACCGACGACG TGCTCTCGGT GGTCACCGAG CTGGTCACCA ACGCCACCCA GCACGCCGCG
ACGACCAGCC AGCTGGCGCT GCGCTCGCAT CCGGGGCGGC TGATGGTCGA GGTCGCCGAC
TGCGACGGCC GCATCCCGCG CCCGGCGGTG ACGCAGCACA TGGACGAGCG GCATCGCGGC
CTGCTGATAG TCGCGCAGCT GTCGCAGCGG TGGGGCGTGC GGCCGACGGA CCGCGGGAAG
ATCGTGTGGG CCGAGATGGG CGAGTCCGCT GGGGAGTAG
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| Protein sequence | MASAFDLSGF SVTDMVVASG ELRAVTAGAA SMEEGSAAIV EWLRHAFTDP ATGRPAFALA
RMFHTVTWDR LTPDLRSYVG TRDPAAAAND DGLPYLTLLA TSGDHPHWSD RRNSRDHQAI
PLSASDVVRR APLALALLDR LLGLQPSPEP VPARPHGGES PAASARLRDR FDVFHVPEAL
GSPYVPTPEF VRDYQIRSAI ALGAVLDSGG PDHPDLPGVR NTSLYTALLY SRVRIPAETA
THFRTLAAAI RLALTPLLAV PLFAPSSPAA GHQVFGARNG NGSGTGLGNG VAGAPTGNGA
PPAAGSAPAG NGAAGNGAAG NGHRPSVNLV PQQASAPPPS SSSVPAAAGD GNAAALAAEA
ELRASQRRLT QETRIVETLY MIGQSLHREL DTRKIAKLAT DAATTAIDAE FGSCFYTLTS
ANGQAQTRFA LAGTVPAERF ENLPMPRPTS LVGAAFPGTA PIRSGDVTAD PRYGQRAPFH
GLPPGHPPVK SFLALPITTI GGTVLGSMYF GHSEPNRFTE RDEQIVKGIA GQAASAMDNA
RLYRLERETA VELQNSLLPA SPPQLAELEI AFTYLAGAQG TQVGGDWFDV IPLSGGRVAL
VIGDVMGRGI RAAAIMGQLR TAVRAYAVMD LPPGQIMHLL NRLVCTMPAS AASSSVAVTT
LSASGTYPVG TGALGPADDG VAEQIATCVY AVYDPAEEVL TWASAGHMPP ALITPEGTAH
LLEDDLGMPL GIEEAVFDEK VQTLAGGSRL LLYTDGLVEC HDAPLTERLN RLSTELVRSD
DGPLGSSGPL SSESVQRTCD RLLHAMLSGD EHDDVALLMV RTRPTRIRKA ALDLDPDPMA
ARAARRFVTA TLSEWDLDHL TDDVLSVVTE LVTNATQHAA TTSQLALRSH PGRLMVEVAD
CDGRIPRPAV TQHMDERHRG LLIVAQLSQR WGVRPTDRGK IVWAEMGESA GE
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