Gene Caci_5269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5269 
Symbol 
ID8336623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6069263 
End bp6069724 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID644958367 
Productphosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 
Protein accessionYP_003115969 
Protein GI256394405 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT CCCGTGACGG CCTGCTGGCC GAGCGGGCCG TCCGGTTCGG CGTCCACGCC 
ACCGACCGGT ACGACGCCGT CCGGCAGTGC GGGGAACTCC TCGTCGAGGT CGGCGCCGTG
GCCGAGGAGT ACGTCCCCTC GATGCGGGAC CGCGAGGACG AGATCTCCAC GTACATCGGC
GCCGGGGTCG CGATCCCGCA CTCGACCGCC GCCGGCAAGA AGTACGTCCG GCGCGACGCG
CTGGCCGTCC TGGTCCTGGC CGAACCCGTC GACTGGGGCG AGGACCAGCA GGTGTCGCTG
TGTGTGGCGA TCGCCGCCCT CGGCGACCGG CACCTGGACA TCCTGGCCGA ACTCGCCGAG
GTCCTGATGG ATCCGGAGCG GGCTGAACAA CTGCACCAGG CGAAAACCGC GAACGAAGTG
ATCCGGCTGC TCCAGCCGGC AGGAAAGGCA GAGAACGTAT GA
 
Protein sequence
MSDSRDGLLA ERAVRFGVHA TDRYDAVRQC GELLVEVGAV AEEYVPSMRD REDEISTYIG 
AGVAIPHSTA AGKKYVRRDA LAVLVLAEPV DWGEDQQVSL CVAIAALGDR HLDILAELAE
VLMDPERAEQ LHQAKTANEV IRLLQPAGKA ENV