Gene Caci_5267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5267 
Symbol 
ID8336621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6067918 
End bp6068199 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content70% 
IMG OID644958365 
ProductPhosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_003115967 
Protein GI256394403 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC GCACCGTCAT AGTCGGATCC ACCAGCGGCC TCCACGCCCG CCCAGCAAAA 
CTGCTGGTCC AAGCCGCCGC CACCCAACCC ACGACAGTGC GCCTCCGCAT AGGCGACCGC
CCCCCGATCG ACACCCGCAG CATCCTCGCC GTCCTCGCCG CCCGAGTGAA ACAAGGCACC
GAGGTCACCC TCCAGGCCGA AGGCGACGGC GCCGAGGAGG CGGTCACGGC CCTGGCCGAG
CTGATCGCCC GGAACCTGGA CGAGGAGGGC GGGAATGCCT GA
 
Protein sequence
MIERTVIVGS TSGLHARPAK LLVQAAATQP TTVRLRIGDR PPIDTRSILA VLAARVKQGT 
EVTLQAEGDG AEEAVTALAE LIARNLDEEG GNA