Gene Caci_5198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5198 
Symbol 
ID8336552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5974193 
End bp5975020 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID644958296 
Producthypothetical protein 
Protein accessionYP_003115898 
Protein GI256394334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0646774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGG GGGAGGATCT CCTACTGCTC GCCATCCATC CGCGCAGCGG CAGGATCCGG 
AACGTCGAGC GCATGTCGCC CGCGCTGCGC GCCGTGGAAC TGCTGGAGCT GAGCCTGGCC
GGGCGAGTGG CGGTGGAGGA GGGCCGGATC GCGACCAAGG ACGCCTCGCC GGTCGGCCAT
CGATTGGTGG ACCACGCCTT GCACTCGCTG AGCTCCGAGG CGAAGCCGCC GAAGGTCGAG
GAGTGGCTGC GGGGGCAGCG CGCGTCGGGT GAGTCCGAAG CGGCGCTGGG CCAGTACGTC
GCGCTGCTGG GACGTCAGCA GGTGATCCGG GTCGAGCGCC GCGCACAGGG CCTGGCCAGA
TACACGCACA TCACGGTGCG CGATCAAGAA CGGGTGTCCT CGGCGCGCGC CCGGATCGAT
CGCGTGGCGC ACGGCGAGGT GTCCGCGACC GCTGACGACC ACGCGCTGGC CGGCATCGTC
CACGCCTGCG GCCTGGGTCC CTGTCTGTAC CGCGGGCCGC ATCGGCTGGT GGCGCGCAGG
CGGCTGGCCC GGTTCGCCGT TCCCGAGGAA GTCACCGAGA GCATGCGCGC CGCGGCGACG
GCTGCCGACG CCGAATTGGC GGCGGCTGTG GCCGAGGCGC TGTCCAGCGG CATCGCGAAG
ATGACCAAAG AACTGACGAC GGTTCTACGC CTGGAGTACC GGCTCGACAC GTACAGCTCG
CACGGCTCCG GCGGAGGCCA CCACCATCAC ACGCCGACCG ACTTCGGCTC GCATTCCGGC
CACCACGCGG GTTCGGGCGG CTTCGGCGGC GGCGGCCATC ACGGTTGA
 
Protein sequence
MTLGEDLLLL AIHPRSGRIR NVERMSPALR AVELLELSLA GRVAVEEGRI ATKDASPVGH 
RLVDHALHSL SSEAKPPKVE EWLRGQRASG ESEAALGQYV ALLGRQQVIR VERRAQGLAR
YTHITVRDQE RVSSARARID RVAHGEVSAT ADDHALAGIV HACGLGPCLY RGPHRLVARR
RLARFAVPEE VTESMRAAAT AADAELAAAV AEALSSGIAK MTKELTTVLR LEYRLDTYSS
HGSGGGHHHH TPTDFGSHSG HHAGSGGFGG GGHHG