| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5179 |
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| Symbol | |
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| ID | 8336533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5951874 |
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| End bp | 5952932 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644958277 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003115879 |
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| Protein GI | 256394315 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGA TGGCTCGCTC CTGCCTCATC CCTCGGACCG GCGCCGGGAC CGGCACAGGG
ACCGACACCG GCTCCTCCGC CGACGCCGGG CACCCGCGCC ACCGCGTCGT GGTCCTCGCC
CTGGACGGCG TGATCCCGTT CGACCTGGGC ATCCCGGCGC GCCTGTTCGG CGCGGCGCCC
GGTCCGGACC TGGAGCCGCT GTACGACGTG GTGACCTGCG GGGTGAGCGC CGGACCGGTC
ACGACGTCCG GGGACTACTC GCTGTACGTC GAGCACGGCG CCGAGGCGCT GGCCGAGGCG
GACACGGTGA TCGTGCCGCC GGCCTACCCG ATCGTGGACG ACCTCGCCGA CGGCGCCCCC
TTGGCGCCGG AGCTGGCCGC CGCGCTGGCC CGCATCCGTC CCGGGACGCG GAAGGTGGCG
CTGTGCACCG GCGCCTACGT CTTCGCCGCC GCAGGTCTGC TCGAGGGCCG CAAGGTGACC
ACGCACTGGC ACCAGGCCGA GCGGATGGAG GAGCTGTTCC CGACCCTGTC AGTGGACCCG
AACGTGCTGT TCATCGATGA CGGCGACGTC CTGACCTCCG CCGGCGTCGC CGCCGCCATC
GACCTGTGCC TGCACATCAT CCGCACCGAC CACGGCAGCG CGGTGGCGAA CGCGGCGGCG
CGCGCCTGCG TGGTCCCGCC CTCGCGCGAC GGCGGCCAGG CGCAGTACAT CGAGCGCCCG
GTCCCGACCC CGGCGGCCAC CGGCACCGGA CCCGCGCGCG CCTGGGCGCT GGAGCGCCTG
CACGAGCCGC TGACGTTGCA GGACCTGGCC GAGCACGCGC GCATGAGTAT CAGGACCTTC
ACCCGCCAGT TCCGCACCGA GACCGGCCAG AGCCCCGGCC AGTGGCTCAC CGGACAGCGC
GTGGACCTGG CGCGACACCT GCTGGAGGCC ACCGACCTGC CGATCGACCG GGTCGCGGAG
CAGGCCGGAT TCGGGACGGC GACCTCGATG CGGCAGCATC TGCGGGCTTC GGTCGGCGTG
TCGCCGCAGG CGTACCGGCG GACGTTCGCG CGGACCTGA
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| Protein sequence | MAQMARSCLI PRTGAGTGTG TDTGSSADAG HPRHRVVVLA LDGVIPFDLG IPARLFGAAP
GPDLEPLYDV VTCGVSAGPV TTSGDYSLYV EHGAEALAEA DTVIVPPAYP IVDDLADGAP
LAPELAAALA RIRPGTRKVA LCTGAYVFAA AGLLEGRKVT THWHQAERME ELFPTLSVDP
NVLFIDDGDV LTSAGVAAAI DLCLHIIRTD HGSAVANAAA RACVVPPSRD GGQAQYIERP
VPTPAATGTG PARAWALERL HEPLTLQDLA EHARMSIRTF TRQFRTETGQ SPGQWLTGQR
VDLARHLLEA TDLPIDRVAE QAGFGTATSM RQHLRASVGV SPQAYRRTFA RT
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