| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5175 |
|---|
| Symbol | |
|---|
| ID | 8336529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5946427 |
|---|
| End bp | 5947506 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644958273 |
|---|
| Product | Threonine aldolase |
|---|
| Protein accession | YP_003115875 |
|---|
| Protein GI | 256394311 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2008] Threonine aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCATCA CCCGCCGCCA CGACCCCGAC TACCGTGGCT TCGCCAGCGA CAACTACGCC
GGGATCCACC CGGAGGTCCT GGAGGCGATC GCCGTCGCCA ACGGCGGCCA CCAGATCTCC
TACGGCGAGG ACGTCTACAC CGAGCACCTG CAGGAGATCT TCCGCGGCCA CTTCGGCCCG
CGCGCCGAGA CCTTCCCGGT GTTCAACGGC ACCGGCGCCA ACGTGGTCGC CCTCGACGCG
ATGAGCGAGC GCTGGGGCTC GGTGATCGCC GCGGCCAGCG CGCACATCAA CGTCGACGAA
TGCGGCGCCC CGGAGAAGAT CGGCGGCCTG AAGCTCCTGA CCGTCGCCAC CCCCGACGGC
AAACTCACCC CCGACCTGAT CGACACTCAC GCCTGGGGCT GGGGCGACCA GCACCGAGCC
CAGCCCCTGG TCGTCGCCAT CACGCAGTCC ACCGAACTCG GCACCTGCTA CACCCCCGAG
GAAATCAAGG CGATCTGCGA CCACGCCCAC CAGCACGGCA TGAAGGTCTT CCTCGACGGC
TCCCGCCTGT CCAACGCCGC CGCCACCCTG GGCCGCCCCT TCCGCGAATT CACCACCGAC
GCCGGCGTAG ACGTCCTGAC CTTCGGCGGC ACCAAAAGCG GCCTCCTGGC CGGCGAATGC
ATCGTGGTCC TGAACCCCGA CGCAGCCCAC GGCGTGATGT ACCTCCGCAA GATGTCCATG
CAGCTGGCCT CCAAGATGCG CTTCCTCTCC GCCCAGTTCG AAGCCCTCCT CACCAACGAC
CTGTGGCACC GCAACGCCTC CCACGCCAAC GCCATGGCCA CCCGCCTAGC CGACGCCGTA
CGCACCATCC CCGGCGTGAC CATCACCCAG CAGGTACAGG CCAACGCAGT CTTCGCAATC
CTGCCCCCCG ACGTCACCGA ACGCCTCCAA AAACGCTTCC GCTTCTACAC CTGGAACGAG
CACACCGGCG AAGTCCGCTG GATGTGCTCC TTCGACACCA CGGAGCCGGA CATCGACGCC
TTCGCCGACG CCGTGCGCGA GGAGATGGCG CAGGGTTCCT CCGCTACCGC AGAGGGCTGA
|
|---|
| Protein sequence | MTITRRHDPD YRGFASDNYA GIHPEVLEAI AVANGGHQIS YGEDVYTEHL QEIFRGHFGP
RAETFPVFNG TGANVVALDA MSERWGSVIA AASAHINVDE CGAPEKIGGL KLLTVATPDG
KLTPDLIDTH AWGWGDQHRA QPLVVAITQS TELGTCYTPE EIKAICDHAH QHGMKVFLDG
SRLSNAAATL GRPFREFTTD AGVDVLTFGG TKSGLLAGEC IVVLNPDAAH GVMYLRKMSM
QLASKMRFLS AQFEALLTND LWHRNASHAN AMATRLADAV RTIPGVTITQ QVQANAVFAI
LPPDVTERLQ KRFRFYTWNE HTGEVRWMCS FDTTEPDIDA FADAVREEMA QGSSATAEG
|
|---|
| |