| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5144 |
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| Symbol | |
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| ID | 8336498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5908006 |
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| End bp | 5910762 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644958242 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003115844 |
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| Protein GI | 256394280 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0156919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAG ACGCGAAACA CCAGCTGCTC GGGCGGAACC GCGAGCTGGA GACCCTGGAC
CGGCTGCTGC GCGAGGTGCG CGAAGGCCGC AGCCGGGCCT TGGTGCTGCG CGGGGAAGCC
GGTATCGGCA AGTCGGCGCT GCTGGACCAC CTCGCCGAGC AGGCGGCGTC GGGGCGCGTG
GGACAGCTGC CGCCGGTGCG GATGCAGACG GTCCGGACCG CCGGCGTCGA GGCCGAGTCC
GACTTCGCCT ACTCGGCGCT GCAACATCTG TGCGCTCCGC TGCTGACGCA CCTGGACCAG
CTGCCGCAGG TGCAACAGGA CGCGCTGCGC GTCGCCTTCG GGCTGAGCGC GGGCAACGCA
CCGGAGATGC TGCTGGTCGG CGTGGCGGTG CTCGGGTTGT TCGCCGAGGC GGCGACCGGC
GCCCCGCTGC TGTGCCTGGT CGACGACGCG CAGTGGCTGG ACCTGATGTC CCAGCGCATC
CTCGCCTTCG TCGGACGGCG CCTGGACGCC GAATCCGTGG CGCTGGTCTT CGCCGAGCGC
GTCACCGACA AGCAGACGGA GGACGGCTTC TCCGGGCTGC CCGCCCTCAG CATCGGCGGG
CTTGGGGACG CCGAGGCGCG GGCGTTGCTC GATGCGGTGC TGCCCGGTCC GGTCGAGGCC
CGCGTCCGGG ACCGGATCGT CGCCGAGACC GGCGGGAACC CGCTCGCGCT GCTGGAGCTG
CCGCGCGGGC TGTCGGCGGC GGAGCTGGCG TTCGGCTTCG GCGGACCGGG CTCGGCGCCG
CTGGCGACCC GGGTCGAGGA GGGTTTCCGG CGGCGTGTGG AGGCGCTGCC CGCCGAGACC
CGCACGCTGC TGCTGGTCGC GGCGGTGGAG CCGGTCGGCG ACGAGCTGCT GCTGTGGCGC
GCGCTACGCC TGCTGGAGGT CGGACCCGAC GCCGCCGCAC CGGCGCAGGC CGCCGGACTG
CTCAACCCCG GCACGCCGCT GCGCTTCCGG CACCCGCTGG TGCGCTCGGC CGTCTGGCAC
GGCGCGGACG GAGCCACGCT GCTGGCGGTC CACGCCGCCC TCGCCGAAGC CACCGACGCC
GATCGCGACC CCGACCGGCG CGCCTGGCAC CGCGCGCACG CCGCGCTCGG CCCGGACGAG
CAGGTCGCCG CCGACCTGGA GCGCTCCGCC GACCGTGCCC TGGCGCGCGG CGGCCGGGCA
GCCGCCGCCT CCTTCCTGGA ACAGGCAGCC GCGCTCAGCC CGGATCCGTC CGAGCGCGCG
CGGCGAGCGT TGGCGGCGGC GCAGGCCTAT CTCAAGGCAG GACTGCCATA CCGGCTGCCG
GACCTGCTCG CCGCCGCCGA ATTGGGTCCG CTGAGCCCGT TGCAGCAGGC CGATGCCAAC
CGGCTGCGCG CCAAGGCTTC GGCCATGACC AACTCCGGGC TCGGCGCCGT TCAGCCGCTG
ATCGACGCCG CGCGCGGTTT GCGGGACCTG GATCCGGCTG CCGCGCGCGA GACGTGCCTG
GCGGCGTTCG GCGCGGCGAT CTGGGCCGGA CGGCTCGACG CGAGCGGGAT GCGGCGGGCC
GCCGAAGCCG CTCGCGAGCT GCCGCCGAGC GACGATATGG GAGGCGTCTT CCTGCGCGCC
TTGACCGCCT GGAGTCTGGA GGGACCGGTC GCCGCCTTCC CGTTGCTGGA GCAGGCGCTG
AGCACCCTCA CCGACGACGC GGACCTGGCT GACATGTGGC CGGCGGCGAA TGCGGCAGTC
GAGCTCGGGG ACTTGCAGGC CTGGCTGAGC GTCACCGAGC GCGCGGTCGG CTTCGCTCGG
CGGACCGGAG CATTTTCGAT CCTGTCGACG GCGTTGCCGT ATCGGGCAGC CTCGCTGGGG
TATGTCGGAC GCCTTCCCGA AGCCTGGGCA CTGCTGGCCG AGGCTTCGGC GACCGAGGAA
GCGGCGGGTG CGGCGACCAG CCTGGTCACC ACGGCGTTGC TCAGCGCGTA TCGGGGACGG
GAGCGCTCGG CGCTGGACGT GATCGACGCG ATGGAACGCG ACGGCGAGCA GCGCGGTCTG
GGGCGGCTCA TCGGCATGGC GGCGTGCTCG CGAGCGGTGC TGCACAACGG TCTGGGCAAC
TATCCGCAGG CGATGGAGTC CGCGCTGCGC GGCATGGAAT ATCAGGACCT TGTCGCCTAC
CGCTGGACGT GCAGCGAACT GGTCGAGGCG GCGAGCCGCG CCGACGGGGC AGCCGCGGCG
GCACAGGCCC GCGAGCGGCT CAGCGACTGG AGCCGCGCCG GCACACCCTG GGCCCTCGGC
GCCCACGCGG TCGCCGACGC CCTCGTCGGC ACCGCCGACC AGGCCGAAGA CCGCTACCGC
GAGGCCATCG CGCACTTCAC CGACGGCGGC CTCGACGTCT TCGTGGCCCG CACCCGCCTG
CTCTACGGCG AGTGGCTACG CCGCCAGAAC CGCCGCGCCC ACGCCCGCGA GGAACTACGC
GCGGCACACG AGGCATGCGT AACGATCGGC CTGGAGGCCT TCGCCGAACG AGCCCGCAGA
GAACTACTCG CCACCGGCGA GACCGTGCGC AAGCAGACCA TCGGCACACC GGTCCTGACA
CCCCAGGAAG CGCAGATCGC CCGCCTGGTG ACCGCCGGCC ACTCGAACGC CGAGATCGGC
GCACAGCTCT TCCTCAGCCC CCGCACAGTC GAATGGCACC TGCGCAAGAT CTTCGTCAAG
GTCGGAATCT CCTCACGCCG TGAGCTGGAC GGCGCCCTGT CGGCGGGGGA GCGCTGA
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| Protein sequence | MPQDAKHQLL GRNRELETLD RLLREVREGR SRALVLRGEA GIGKSALLDH LAEQAASGRV
GQLPPVRMQT VRTAGVEAES DFAYSALQHL CAPLLTHLDQ LPQVQQDALR VAFGLSAGNA
PEMLLVGVAV LGLFAEAATG APLLCLVDDA QWLDLMSQRI LAFVGRRLDA ESVALVFAER
VTDKQTEDGF SGLPALSIGG LGDAEARALL DAVLPGPVEA RVRDRIVAET GGNPLALLEL
PRGLSAAELA FGFGGPGSAP LATRVEEGFR RRVEALPAET RTLLLVAAVE PVGDELLLWR
ALRLLEVGPD AAAPAQAAGL LNPGTPLRFR HPLVRSAVWH GADGATLLAV HAALAEATDA
DRDPDRRAWH RAHAALGPDE QVAADLERSA DRALARGGRA AAASFLEQAA ALSPDPSERA
RRALAAAQAY LKAGLPYRLP DLLAAAELGP LSPLQQADAN RLRAKASAMT NSGLGAVQPL
IDAARGLRDL DPAAARETCL AAFGAAIWAG RLDASGMRRA AEAARELPPS DDMGGVFLRA
LTAWSLEGPV AAFPLLEQAL STLTDDADLA DMWPAANAAV ELGDLQAWLS VTERAVGFAR
RTGAFSILST ALPYRAASLG YVGRLPEAWA LLAEASATEE AAGAATSLVT TALLSAYRGR
ERSALDVIDA MERDGEQRGL GRLIGMAACS RAVLHNGLGN YPQAMESALR GMEYQDLVAY
RWTCSELVEA ASRADGAAAA AQARERLSDW SRAGTPWALG AHAVADALVG TADQAEDRYR
EAIAHFTDGG LDVFVARTRL LYGEWLRRQN RRAHAREELR AAHEACVTIG LEAFAERARR
ELLATGETVR KQTIGTPVLT PQEAQIARLV TAGHSNAEIG AQLFLSPRTV EWHLRKIFVK
VGISSRRELD GALSAGER
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