Gene Caci_5130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5130 
Symbol 
ID8336484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5888720 
End bp5889559 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID644958228 
Productalpha/beta hydrolase fold protein-3 domain protein 
Protein accessionYP_003115830 
Protein GI256394266 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.957663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC TTGTTCACGA AGGCCTGACC TACGCCGAGA TCCAGGGCTA CCGGCCGCTC 
CTGCTCGACC TGCACCTCCC GGTGACCGCC AGTCCGCAGT CGCCGGTGCC GGTCGTGGTC
TGGATGCACG GCGGCGCGTT CTGGGAGGGC GATCGCAGGT ATCTGCCGTC GAATCTCGCC
CCGAACGCGG TGTTCGACAC GCTGGTGGCG TCCGGCATCG CCGCCGCGAC GATCGACTAC
CGGCTCTCCG GCGAGGCTAC ATACCCGGCG CAGCTGCACG ATGTCCGGGC CGCGATCAGA
TATCTGCGTT CCAACGCCGC CACCTGGGGA TTGGACGCCA CGCGCGTGGG CGTCTGGGGC
GAGTCGTCCG GCGGGACGCT CGGCGCGCTC GCAGCCCTCG CCCCCACCGA CAGCGACGCC
ACCAGCGCCA CCAACGCCAC CAACGCCACC AACGCCACCG ACCAACCGAT CACCGCCGCC
GCCCTGTGGT GCTCCCCCAC CGATCTGGTG TCACTGCGCC ACTTCAGCGC GATCTCCGGA
CTTCTCGGCG GCGGCGACCC CGAGGCGCTG GAAGCCGCAG CCGTGCAGGC CAGCCCTCTG
ACCCACGTCC GCGGCGACGC GCCGGCGTTC CTCATCATGC ACGGCGACGC CGACCGCACA
GTGCCGGTCC ACCAAGCCGA ACTCCTGCAC AAAGCCCTGC TCGCCGTCGG AGCACGCTCC
ACCTTCACAG CCGTCGAGGG TGCCGGCCAC GTCTTCGACG GACACCCCGA CGCTCAGCAG
CTCGTCGAGC AGGTTGTGGC CTTCTTCGCC CAGGAGTTCG CGCAGCCCGC TGCGGCCTAG
 
Protein sequence
MSTLVHEGLT YAEIQGYRPL LLDLHLPVTA SPQSPVPVVV WMHGGAFWEG DRRYLPSNLA 
PNAVFDTLVA SGIAAATIDY RLSGEATYPA QLHDVRAAIR YLRSNAATWG LDATRVGVWG
ESSGGTLGAL AALAPTDSDA TSATNATNAT NATDQPITAA ALWCSPTDLV SLRHFSAISG
LLGGGDPEAL EAAAVQASPL THVRGDAPAF LIMHGDADRT VPVHQAELLH KALLAVGARS
TFTAVEGAGH VFDGHPDAQQ LVEQVVAFFA QEFAQPAAA